RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 GHRHRQ02643 423 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 FPGSQ05932 587 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 ARHGEF16Q5VV41 709 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
BEST3-209ENST00000548658 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
BEST3-209ENST00000548658 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
BEST3-209ENST00000548658 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
BEST3-209ENST00000548658 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
BEST3-209ENST00000548658 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
BEST3-209ENST00000548658 DDAH1O94760 285 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 CFBP00751 764 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 CALM1P0DP23 149 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 CALM2P0DP24 149 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 CALM3P0DP25 149 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 GNAQP50148 359 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 HSD17B4P51659 736 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 NECTIN1Q15223 517 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 SHHQ15465 462 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 FAM126BQ8IXS8 530 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 TMEM199Q8N511 208 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 TBC1D5Q92609 795 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.29
BEST3-209ENST00000548658 MYH6P13533 1939 aa13.21□□□□□ -0.3
BEST3-209ENST00000548658 LCTP09848 1927 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 A6NJR5 290 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 SLC27A2O14975 620 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 PRC1O43663 620 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 CD4P01730 458 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 ITGB8P26012 769 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 LIFRP42702 1097 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 ANTXR2P58335 489 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
BEST3-209ENST00000548658 KCNV1Q6PIU1 500 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 HOMER1Q86YM7 354 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 DEFB123Q8N688 67 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 PIGSQ96S52 555 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
BEST3-209ENST00000548658 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 SZT2Q5T011 3432 aa13.2□□□□□ -0.3
BEST3-209ENST00000548658 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
BEST3-209ENST00000548658 NR3C2P08235 984 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 PURAQ00577 322 aaKnown RBP13.19□□□□□ -0.3
BEST3-209ENST00000548658 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
BEST3-209ENST00000548658 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
BEST3-209ENST00000548658 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 PXMP2Q9NR77 195 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
BEST3-209ENST00000548658 CYTH3O43739 400 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 CDC45O75419 566 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 GH1P01241 217 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 MYL3P08590 195 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
BEST3-209ENST00000548658 C9orf50Q5SZB4 431 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 RNPC3Q96LT9 517 aaKnown RBP13.18□□□□□ -0.3
BEST3-209ENST00000548658 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
BEST3-209ENST00000548658 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
BEST3-209ENST00000548658 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 OPLAHO14841 1288 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 TGFB3P10600 412 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 PSMC6P62333 389 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 LAMC2Q13753 1193 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 KRT32Q14532 448 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 ALDH8A1Q9H2A2 487 aaPredicted RBP13.17□□□□□ -0.3
BEST3-209ENST00000548658 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
BEST3-209ENST00000548658 DDX41Q9UJV9 622 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms