RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 CYP39A1Q9NYL5 469 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 ADD3Q9UEY8 706 aaKnown RBP10.08□□□□□ -0.8
SP1-203ENST00000548560 NRBP1Q9UHY1 535 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 B4DLN1 442 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 PLEKHA8P1O95397 391 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 SGPL1O95470 568 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 TFRCP02786 760 aaKnown RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 CYBAP13498 195 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 CALML3P27482 149 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 CCND3P30281 292 aaPredicted RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 MRPL12P52815 198 aaKnown RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 CNTN2Q02246 1040 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 BAATQ14032 418 aaPredicted RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 PPP2R5BQ15173 497 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 TMTC3Q6ZXV5 915 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 FAM133AQ8N9E0 248 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 UPF3BQ9BZI7 483 aaKnown RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 UPF2Q9HAU5 1272 aaKnown RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
SP1-203ENST00000548560 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
SP1-203ENST00000548560 SEPT4O43236 478 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 CYTH3O43739 400 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 CFBP00751 764 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
SP1-203ENST00000548560 RPS6P62753 249 aaKnown RBP10.06□□□□□ -0.8
SP1-203ENST00000548560 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 MAMDC4Q6UXC1 1216 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 SLC30A10Q6XR72 485 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 FBXL16Q8N461 479 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 CCDC82Q8N4S0 544 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 CLEC4DQ8WXI8 215 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 ZMYND15Q9H091 742 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 DDX20Q9UHI6 824 aaKnown RBP10.06□□□□□ -0.8
SP1-203ENST00000548560 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
SP1-203ENST00000548560 NID2Q14112 1375 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 LOC102724159A0A0B4J2E5 919 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 RARBP10826 455 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 AKR1A1P14550 325 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 ALDH5A1P51649 535 aaPredicted RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 PWP2Q15269 919 aaKnown RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 PRAMEF19Q5SWL8 479 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 SRBD1Q8N5C6 995 aaKnown RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 DNERQ8NFT8 737 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 CUL5Q93034 780 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 SHISA4Q96DD7 197 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 ABHD16BQ9H3Z7 469 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
SP1-203ENST00000548560 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
SP1-203ENST00000548560 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
SP1-203ENST00000548560 IGHA2P01877 340 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 FECHP22830 423 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 PTGDRQ13258 359 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 ACVR2BQ13705 512 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 TOB2Q14106 344 aaPredicted RBP10.04□□□□□ -0.8
SP1-203ENST00000548560 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 CPLX2Q6PUV4 134 aaKnown RBP10.04□□□□□ -0.8
SP1-203ENST00000548560 HEATR3Q7Z4Q2 680 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 FGD4Q96M96 766 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
SP1-203ENST00000548560 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
SP1-203ENST00000548560 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
SP1-203ENST00000548560 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 KBTBD13C9JR72 458 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 CPLX1O14810 134 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 SNAI1O95863 264 aaPredicted RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 ZNF865P0CJ78 1059 aaPredicted RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 CDC27P30260 824 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 HSD17B4P51659 736 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 ANO1Q5XXA6 986 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 EEPD1Q7L9B9 569 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 NECAB2Q7Z6G3 386 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 FBXO16Q8IX29 292 aaPredicted RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
SP1-203ENST00000548560 ARRDC4Q8NCT1 418 aa10.03□□□□□ -0.8
SP1-203ENST00000548560 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms