RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 DIS3L2Q8IYB7 885 aaKnown RBP8.18□□□□□ -1.1
TMEM116-206ENST00000548283 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 TMEM174Q8WUU8 243 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 KCNN1Q92952 543 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 FRMPD3Q5JV73 1810 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 SPTLC2O15270 562 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 PRDM1O75626 825 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 PARP1P09874 1014 aaKnown RBP8.18□□□□□ -1.1
TMEM116-206ENST00000548283 LIG1P18858 919 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 TERF2Q15554 542 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 ECM1Q16610 540 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 SARM1Q6SZW1 724 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 NLGN2Q8NFZ4 835 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
TMEM116-206ENST00000548283 MKNK2Q9HBH9 465 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 JAG2Q9Y219 1238 aa8.18□□□□□ -1.1
TMEM116-206ENST00000548283 USP27XA6NNY8 438 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CPLX1O14810 134 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 ACTN4O43707 911 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 NRDCO43847 1150 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 VEGFAP15692 232 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 ICE2Q659A1 982 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 NFXL1Q6ZNB6 911 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 NPAS4Q8IUM7 802 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 IGSF22Q8N9C0 903 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 TSPAN18Q96SJ8 248 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 PPP1R12CQ9BZL4 782 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 GPRC5DQ9NZD1 345 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CEP131Q9UPN4 1083 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 MYPNQ86TC9 1320 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 USP17L5A8MUK1 530 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 BTBD18B2RXH4 712 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 H3BQV1 296 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 WNT7AO00755 349 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 ZBTB5O15062 677 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CTNND1O60716 968 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 DTNBO60941 627 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 NR1I2O75469 434 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 MYL1P05976 194 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 FXR2P51116 673 aaKnown RBP eCLIP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 PUS10Q3MIT2 529 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 IFFO2Q5TF58 517 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 PLA2G4DQ86XP0 818 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CCDC144CPQ8IYA2 1237 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 BLIDQ8IZY5 108 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 IER2Q9BTL4 223 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 MRVI1Q9Y6F6 885 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 PLXNB2O15031 1838 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 DOCK5Q9H7D0 1870 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 KIAA1217Q5T5P2 1943 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 PES1O00541 588 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 DPYSL4O14531 572 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 ZBTB7AO95365 584 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 XBP1P17861 261 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 LRMPQ12912 555 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CERKLQ49MI3 558 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 Q4G0T1 1027 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 CCDC12Q8WUD4 166 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 MRPS27Q92552 414 aaKnown RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 GJB4Q9NTQ9 266 aa8.17□□□□□ -1.1
TMEM116-206ENST00000548283 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
TMEM116-206ENST00000548283 A0A1W2PRG0 241 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 VPS37CA5D8V6 355 aaPredicted RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 CALRP27797 417 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 NAP1L1P55209 391 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 IQCB1Q15051 598 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 KIAA1755Q5JYT7 1200 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 KIAA0825Q8IV33 1275 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 ADGRF4Q8IZF3 695 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 PYM1Q9BRP8 204 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 CCSER1Q9C0I3 900 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 TDRD3Q9H7E2 651 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 DDX56Q9NY93 547 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 FARP1Q9Y4F1 1045 aaPredicted RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 EEF2P13639 858 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 CDC25BP30305 580 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 LONP1P36776 959 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 PHLDB3Q6NSJ2 640 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 PDXDC2PQ6P474 469 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 APOBEC3FQ8IUX4 373 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 NAP1L4Q99733 375 aaKnown RBP8.16□□□□□ -1.1
TMEM116-206ENST00000548283 MAGEF1Q9HAY2 307 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
TMEM116-206ENST00000548283 FDX1P10109 184 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms