RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 PKN2Q16513 984 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 PIK3AP1Q6ZUJ8 805 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 GMCL1P1Q8NEA9 526 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 WDR18Q9BV38 432 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 JMJD4Q9H9V9 463 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 WNT7AO00755 349 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 PEX10O60683 326 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 TRAPPC10P48553 1259 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 BLIDQ8IZY5 108 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 CCDC148Q8NFR7 591 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 ACER1Q8TDN7 264 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 SMCR8Q8TEV9 937 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 SERTAD1Q9UHV2 236 aa18.76■□□□□ 0.59
CHMP1A-204ENST00000547687 NDUFB10O96000 172 aa18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 PROCA1Q8NCQ7 364 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 PCDHA4Q9UN74 947 aa18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 PTPN22Q9Y2R2 807 aa18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 PCDHA5Q9Y5H7 936 aa18.75■□□□□ 0.59
CHMP1A-204ENST00000547687 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 NAPAP54920 295 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 TPM4P67936 248 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 ANKRD13CQ8N6S4 541 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 TRIM47Q96LD4 638 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 NUP88Q99567 741 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 BCRP11274 1271 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 PSMC4P43686 418 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 POSTNQ15063 836 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 KANK3Q6NY19 840 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 FEZ1Q99689 392 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
CHMP1A-204ENST00000547687 M0R2N6 131 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 PTGDRQ13258 359 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 KIF22Q14807 665 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 PDILTQ8N807 584 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 RASGRP4Q8TDF6 673 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 ZMYND12Q9H0C1 365 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 SYNPO2Q9UMS6 1093 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 TMX2Q9Y320 296 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 PNMA6FA0A0J9YX94 578 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 IKBKBO14920 756 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 MYCP01106 439 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 ATP2C1P98194 919 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 NCAPHQ15003 741 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 GALNT17Q6IS24 598 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 DAGLBQ8NCG7 672 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 CCDC12Q8WUD4 166 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 COA7Q96BR5 231 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 EPSTI1Q96J88 318 aa18.73■□□□□ 0.59
CHMP1A-204ENST00000547687 SMCO2A6NFE2 343 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 ACTN4O43707 911 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 KIAA1755Q5JYT7 1200 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 PYCARDQ9ULZ3 195 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 PCDHA6Q9UN73 950 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 SLC45A1Q9Y2W3 748 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 PCDHA8Q9Y5H6 950 aa18.72■□□□□ 0.59
CHMP1A-204ENST00000547687 ZBTB5O15062 677 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 PPP1R11O60927 126 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 BMP3P12645 472 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 hCG_1984214I3L0E3 225 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 MCM7P33993 719 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 NT5DC1Q5TFE4 455 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 C17orf53Q8N3J3 647 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 ZNF713Q8N859 430 aaPredicted RBP18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 SYMPKQ92797 1274 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 P2RX7Q99572 595 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 C6orf50Q9HD87 102 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
CHMP1A-204ENST00000547687 VWA3AA6NCI4 1184 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 C19orf81C9J6K1 198 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 GNA11P29992 359 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 SARSP49591 514 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 SMARCE1Q969G3 411 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 DHX58Q96C10 678 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 CCDC34Q96HJ3 373 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 MAN1B1Q9UKM7 699 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 PNMA3Q9UL41 463 aa18.7■□□□□ 0.58
CHMP1A-204ENST00000547687 CCDC194A0A1B0GVG4 234 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms