RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SLC39A2Q9NP94 309 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 CTAGE9A4FU28 777 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 MMP10P09238 476 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 SLURP2P0DP57 97 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 BMS1Q14692 1282 aaKnown RBP17.34■□□□□ 0.37
BRF1-212ENST00000547562 TEX35Q5T0J7 233 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 CENPPQ6IPU0 288 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 SLC35F6Q8N357 371 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 RAD54LQ92698 747 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 GOLGA1Q92805 767 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 NUP58Q9BVL2 599 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 TTYH3Q9C0H2 523 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 SEMA6BQ9H3T3 888 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 DBNDD1Q9H9R9 158 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
BRF1-212ENST00000547562 CDC23Q9UJX2 597 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 SCN9AQ15858 1988 aa17.34■□□□□ 0.37
BRF1-212ENST00000547562 MTIF2P46199 727 aaKnown RBP17.33■□□□□ 0.37
BRF1-212ENST00000547562 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 TUBB2AQ13885 445 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 TSR1Q2NL82 804 aaKnown RBP17.33■□□□□ 0.37
BRF1-212ENST00000547562 TMEM119Q4V9L6 283 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 MIIPQ5JXC2 388 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 WDR59Q6PJI9 974 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.37
BRF1-212ENST00000547562 RETREG2Q8NC44 543 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 NUDT12Q9BQG2 462 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 TUBB2BQ9BVA1 445 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 PSTPIP2Q9H939 334 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 KCNQ5Q9NR82 932 aa17.33■□□□□ 0.37
BRF1-212ENST00000547562 TMCO3Q6UWJ1 677 aa17.33■□□□□ 0.36
BRF1-212ENST00000547562 HAS1Q92839 578 aa17.33■□□□□ 0.36
BRF1-212ENST00000547562 NOC4LQ9BVI4 516 aaKnown RBP17.33■□□□□ 0.36
BRF1-212ENST00000547562 DHX36Q9H2U1 1008 aaKnown RBP17.33■□□□□ 0.36
BRF1-212ENST00000547562 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
BRF1-212ENST00000547562 FHOD1Q9Y613 1164 aa17.33■□□□□ 0.36
BRF1-212ENST00000547562 ZRANB2O95218 330 aaKnown RBP eCLIP17.32■□□□□ 0.36
BRF1-212ENST00000547562 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
BRF1-212ENST00000547562 TRIM21P19474 475 aaKnown RBP17.32■□□□□ 0.36
BRF1-212ENST00000547562 MEA1Q16626 185 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 KIF4BQ2VIQ3 1234 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 DYMQ7RTS9 669 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 SRGAP1Q7Z6B7 1085 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
BRF1-212ENST00000547562 RASSF10A6NK89 507 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 DMTNQ08495 405 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
BRF1-212ENST00000547562 LRRC27Q9C0I9 530 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 AGPAT5Q9NUQ2 364 aa17.32■□□□□ 0.36
BRF1-212ENST00000547562 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
BRF1-212ENST00000547562 CACNB3P54284 484 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 TCP10Q12799 353 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 KIAA0825Q8IV33 1275 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 GUF1Q8N442 669 aaKnown RBP17.31■□□□□ 0.36
BRF1-212ENST00000547562 CEP112Q8N8E3 955 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.362e-8■■□□□ 12.3
BRF1-212ENST00000547562 MKL1Q969V6 931 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 ERGIC2Q96RQ1 377 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 PNMA6AP0CW24 399 aaPredicted RBP17.31■□□□□ 0.36
BRF1-212ENST00000547562 HOXA7P31268 230 aaPredicted RBP17.31■□□□□ 0.36
BRF1-212ENST00000547562 KLK7P49862 253 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 DDX12PQ92771 950 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 GLT8D2Q9H1C3 349 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
BRF1-212ENST00000547562 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 FAM196BA6NMK8 535 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 PLSCR1O15162 318 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 ZBED6P86452 979 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 EHHADHQ08426 723 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 FIGNQ5HY92 759 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 DCAF4Q8WV16 495 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
BRF1-212ENST00000547562 IDEP14735 1019 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 SLC1A4P43007 532 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 GABPB1Q06547 395 aaPredicted RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 PSMD2Q13200 908 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 ECM1Q16610 540 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
BRF1-212ENST00000547562 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 HAUS4Q9H6D7 363 aa17.3■□□□□ 0.36
BRF1-212ENST00000547562 PCDHA12Q9UN75 941 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms