RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MCM3APO60318 1980 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CCDC196A0A1B0GTZ2 297 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 PALM3A6NDB9 673 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CPLX1O14810 134 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 TLR3O15455 904 aaKnown RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 DHX16O60231 1041 aaKnown RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 TIMP1P01033 207 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 FOSL2P15408 326 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CDC27P30260 824 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 GNAQP50148 359 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 SCRN1Q12765 414 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 PPIGQ13427 754 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 ACVR2BQ13705 512 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 KCNA10Q16322 511 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CPXCR1Q8N123 301 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 STAG2Q8N3U4 1231 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 CHURC1Q8WUH1 139 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
HDAC7-226ENST00000547259 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
HDAC7-226ENST00000547259 VCANP13611 3396 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 KLRF2D3W0D1 207 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 C6orf222P0C671 652 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-226ENST00000547259 STAT2P52630 851 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 FAAP100Q0VG06 881 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 TTBK2Q6IQ55 1244 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 MFSD5Q6N075 450 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 CPLX2Q6PUV4 134 aaKnown RBP13.95□□□□□ -0.18
HDAC7-226ENST00000547259 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 VTI1AQ96AJ9 217 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
HDAC7-226ENST00000547259 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-226ENST00000547259 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 CDKL5O76039 1030 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 SNAI1O95863 264 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 SLC16A2P36021 539 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 SLC4A3P48751 1232 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 GJA9P57773 515 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 ST3GAL1Q11201 340 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 TKFCQ3LXA3 575 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 CMTR1Q8N1G2 835 aaKnown RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 TMEM199Q8N511 208 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 UBA5Q9GZZ9 404 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 CDH23Q9H251 3354 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 MTIF3Q9H2K0 278 aaKnown RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 FAM217BQ9NTX9 383 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-226ENST00000547259 EYSQ5T1H1 3165 aa13.94□□□□□ -0.18
HDAC7-226ENST00000547259 CNTNAP5Q8WYK1 1306 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 ASB14A6NK59 587 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 ZEB2O60315 1214 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 CABYRO75952 493 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 CDK7P50613 346 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 CCDC144BQ3MJ40 725 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 GNASQ5JWF2 1037 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 CCSAPQ6IQ19 270 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-226ENST00000547259 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-226ENST00000547259 CCDC82Q8N4S0 544 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 MYLIPQ8WY64 445 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
HDAC7-226ENST00000547259 TTYH1Q9H313 450 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-226ENST00000547259 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
HDAC7-226ENST00000547259 RIPK3Q9Y572 518 aa13.93□□□□□ -0.18
HDAC7-226ENST00000547259 ARVCFO00192 962 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 PLA2G6O60733 806 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 ASGR1P07306 291 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
HDAC7-226ENST00000547259 IFNAR1P17181 557 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 DNAJB2P25686 324 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 ITGB8P26012 769 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 NKX3-2P78367 333 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 SRBD1Q8N5C6 995 aaKnown RBP13.92□□□□□ -0.18
HDAC7-226ENST00000547259 SPZ1Q9BXG8 430 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 VAT1LQ9HCJ6 419 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 TBX21Q9UL17 535 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 PRR12Q9ULL5 1215 aa13.92□□□□□ -0.18
HDAC7-226ENST00000547259 BAZ2BQ9UIF8 2168 aaKnown RBP13.92□□□□□ -0.18
HDAC7-226ENST00000547259 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 PPFIA3O75145 1194 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 SSRP1Q08945 709 aaKnown RBP13.91□□□□□ -0.18
HDAC7-226ENST00000547259 CUL4AQ13619 759 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 NTRK3Q16288 839 aa13.91□□□□□ -0.18
HDAC7-226ENST00000547259 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms