RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 SLFN13Q68D06 897 aa28.08■■■□□ 2.09
PRDM4-202ENST00000547188 CAGE1Q8TC20 777 aa28.08■■■□□ 2.09
PRDM4-202ENST00000547188 DHX38Q92620 1227 aaKnown RBP28.08■■■□□ 2.09
PRDM4-202ENST00000547188 COPS5Q92905 334 aa28.08■■■□□ 2.09
PRDM4-202ENST00000547188 PLXNA3P51805 1871 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 CXCL10P02778 98 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 LTBRP36941 435 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 COL19A1Q14993 1142 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 EPC2Q52LR7 807 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.07■■■□□ 2.08
PRDM4-202ENST00000547188 PRRX2Q99811 253 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 INSL6Q9Y581 213 aa28.07■■■□□ 2.08
PRDM4-202ENST00000547188 FDX1P10109 184 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 IKQ13123 557 aaPredicted RBP28.06■■■□□ 2.08
PRDM4-202ENST00000547188 SMAD2Q15796 467 aaKnown RBP28.06■■■□□ 2.08
PRDM4-202ENST00000547188 BRDTQ58F21 947 aaPredicted RBP28.06■■■□□ 2.08
PRDM4-202ENST00000547188 GDF6Q6KF10 455 aaPredicted RBP28.06■■■□□ 2.08
PRDM4-202ENST00000547188 TRIM67Q6ZTA4 783 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 RPAINQ86UA6 219 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 SUGP1Q8IWZ8 645 aaKnown RBP28.06■■■□□ 2.08
PRDM4-202ENST00000547188 MKL1Q969V6 931 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 CEP95Q96GE4 821 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 BCL11AQ9H165 835 aa28.06■■■□□ 2.08
PRDM4-202ENST00000547188 STAT2P52630 851 aa28.05■■■□□ 2.08
PRDM4-202ENST00000547188 GPM6BQ13491 265 aa28.05■■■□□ 2.08
PRDM4-202ENST00000547188 IKBKEQ14164 716 aa28.05■■■□□ 2.08
PRDM4-202ENST00000547188 GMCL1P1Q8NEA9 526 aa28.05■■■□□ 2.08
PRDM4-202ENST00000547188 NSUN3Q9H649 340 aaKnown RBP28.05■■■□□ 2.08
PRDM4-202ENST00000547188 ALG13Q9NP73 1137 aaKnown RBP28.05■■■□□ 2.08
PRDM4-202ENST00000547188 RBM47A0AV96 593 aaKnown RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 ALDH5A1P51649 535 aaPredicted RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 DLX2Q07687 328 aaPredicted RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 RPAP2Q8IXW5 612 aaPredicted RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 POP1Q99575 1024 aaKnown RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 ARPP21Q9UBL0 812 aaPredicted RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 RIF1Q5UIP0 2472 aaKnown RBP28.04■■■□□ 2.08
PRDM4-202ENST00000547188 RAD50Q92878 1312 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 A6NJR5 290 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 MBTPS2O43462 519 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 KPNA6O60684 536 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 PRDM1O75626 825 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 CKBP12277 381 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 ATOH1Q92858 354 aaPredicted RBP28.03■■■□□ 2.08
PRDM4-202ENST00000547188 MTMR4Q9NYA4 1195 aa28.03■■■□□ 2.08
PRDM4-202ENST00000547188 MINDY4BA8MYZ0 360 aa28.02■■■□□ 2.08
PRDM4-202ENST00000547188 H3BNC9 293 aa28.02■■■□□ 2.08
PRDM4-202ENST00000547188 BAATQ14032 418 aaPredicted RBP28.02■■■□□ 2.08
PRDM4-202ENST00000547188 PAG1Q9NWQ8 432 aa28.02■■■□□ 2.08
PRDM4-202ENST00000547188 EFCAB14O75071 495 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 PPP2R5BQ15173 497 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 MYOCDQ8IZQ8 938 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 CHURC1Q8WUH1 139 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 STAG1Q8WVM7 1258 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 PUS7LQ9H0K6 701 aaKnown RBP28.01■■■□□ 2.07
PRDM4-202ENST00000547188 FAM186AA6NE01 2351 aa28.01■■■□□ 2.07
PRDM4-202ENST00000547188 STXBP3O00186 592 aa28■■■□□ 2.07
PRDM4-202ENST00000547188 TTLL1O95922 423 aa28■■■□□ 2.07
PRDM4-202ENST00000547188 HTRA4P83105 476 aaPredicted RBP28■■■□□ 2.07
PRDM4-202ENST00000547188 FAM160B2Q86V87 743 aa28■■■□□ 2.07
PRDM4-202ENST00000547188 ERC1Q8IUD2 1116 aa28■■■□□ 2.07
PRDM4-202ENST00000547188 FBXL6Q8N531 539 aa28■■■□□ 2.07
PRDM4-202ENST00000547188 SP7Q8TDD2 431 aaPredicted RBP28■■■□□ 2.07
PRDM4-202ENST00000547188 PARNO95453 639 aaKnown RBP27.99■■■□□ 2.07
PRDM4-202ENST00000547188 VCPP55072 806 aaKnown RBP27.99■■■□□ 2.07
PRDM4-202ENST00000547188 PKN1Q16512 942 aa27.99■■■□□ 2.07
PRDM4-202ENST00000547188 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
PRDM4-202ENST00000547188 ADD3Q9UEY8 706 aaKnown RBP27.99■■■□□ 2.07
PRDM4-202ENST00000547188 CCPG1Q9ULG6 757 aa27.99■■■□□ 2.07
PRDM4-202ENST00000547188 MCCP23508 829 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 RBL2Q08999 1139 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 MBTPS1Q14703 1052 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 SBK1Q52WX2 424 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 TMEM192Q8IY95 271 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 ZNF444Q8N0Y2 327 aaPredicted RBP27.98■■■□□ 2.07
PRDM4-202ENST00000547188 SAMD11Q96NU1 681 aa27.98■■■□□ 2.07
PRDM4-202ENST00000547188 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.98■■■□□ 2.07
PRDM4-202ENST00000547188 NKRFO15226 690 aaKnown RBP eCLIP27.97■■■□□ 2.07
PRDM4-202ENST00000547188 SLC1A4P43007 532 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 CTC1Q2NKJ3 1217 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 KCTD1Q719H9 257 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 RHPN1Q8TCX5 695 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 PRR12Q9ULL5 1215 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 RALGAPA2Q2PPJ7 1873 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 MYO15AQ9UKN7 3530 aa27.97■■■□□ 2.07
PRDM4-202ENST00000547188 AMHP03971 560 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 TXNP10599 105 aaKnown RBP27.96■■■□□ 2.07
PRDM4-202ENST00000547188 ZXDAP98168 799 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 UBE3CQ15386 1083 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 ZNF618Q5T7W0 954 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 TRAF7Q6Q0C0 670 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 WNT8BQ93098 351 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 SYNPO2Q9UMS6 1093 aa27.96■■■□□ 2.07
PRDM4-202ENST00000547188 DCHS1Q96JQ0 3298 aa27.95■■■□□ 2.07
PRDM4-202ENST00000547188 COL4A6Q14031 1691 aa27.95■■■□□ 2.07
PRDM4-202ENST00000547188 H0Y858 1186 aa27.95■■■□□ 2.06
PRDM4-202ENST00000547188 GTF2F1P35269 517 aaKnown RBP eCLIP27.95■■■□□ 2.06
PRDM4-202ENST00000547188 HYAL1Q12794 435 aa27.95■■■□□ 2.06
PRDM4-202ENST00000547188 RASGRP2Q7LDG7 609 aa27.95■■■□□ 2.06
PRDM4-202ENST00000547188 ASCL5Q7RTU5 278 aa27.95■■■□□ 2.06
PRDM4-202ENST00000547188 SESTD1Q86VW0 696 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms