RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 TROAPQ12815 778 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 ITGA7Q13683 1181 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 STXBP2Q15833 593 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 CREB3L3Q68CJ9 461 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 FAM126BQ8IXS8 530 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 TMTC2Q8N394 836 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 MTMR8Q96EF0 704 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 TAAR1Q96RJ0 339 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 TBX21Q9UL17 535 aa12.41□□□□□ -0.42
LINC00661-202ENST00000547102 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 TIMP1P01033 207 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 HSD17B4P51659 736 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 PPIGQ13427 754 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00661-202ENST00000547102 TMEM63BQ5T3F8 832 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 SEPT14Q6ZU15 432 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 SKAP1Q86WV1 359 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 DEFB123Q8N688 67 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
LINC00661-202ENST00000547102 PIGSQ96S52 555 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
LINC00661-202ENST00000547102 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
LINC00661-202ENST00000547102 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
LINC00661-202ENST00000547102 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 SH2B2O14492 632 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 KPNA6O60684 536 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 PPP1R11O60927 126 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 CALM1P0DP23 149 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 CALM2P0DP24 149 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 CALM3P0DP25 149 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 ITGB8P26012 769 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 GNAQP50148 359 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 PSMC6P62333 389 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 SHHQ15465 462 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 TMEM199Q8N511 208 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 RRP36Q96EU6 259 aaKnown RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 MTG1Q9BT17 334 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-202ENST00000547102 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 PXMP2Q9NR77 195 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
LINC00661-202ENST00000547102 OPLAHO14841 1288 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 EIF3JO75822 258 aaKnown RBP12.38□□□□□ -0.43
LINC00661-202ENST00000547102 GH1P01241 217 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 NR3C2P08235 984 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-202ENST00000547102 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
LINC00661-202ENST00000547102 GHRHRQ02643 423 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 NECTIN1Q15223 517 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 SLC43A3Q8NBI5 491 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 CUL5Q93034 780 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 HIPK3Q9H422 1215 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
LINC00661-202ENST00000547102 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 A6NJR5 290 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 CYTH3O43739 400 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 ARIH2O95376 493 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 CD4P01730 458 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 CCND2P30279 289 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 LIFRP42702 1097 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 KRT32Q14532 448 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 ZNF697Q5TEC3 545 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 COPS5Q92905 334 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
LINC00661-202ENST00000547102 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
LINC00661-202ENST00000547102 B4GALT4O60513 344 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 MMP3P08254 477 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 CYP2C18P33260 490 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 EPHB4P54760 987 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 CHMP4BP1P59074 171 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 CCDC62Q6P9F0 684 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 PSRC1Q6PGN9 363 aaPredicted RBP12.36□□□□□ -0.43
LINC00661-202ENST00000547102 KCNV1Q6PIU1 500 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 Q7L0L9 218 aa12.36□□□□□ -0.43
LINC00661-202ENST00000547102 MICU3Q86XE3 530 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms