RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 ZEB2O60315 1214 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 BMP8BP34820 402 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 TRIM60Q495X7 471 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
CCDC38-205ENST00000546947 RMDN3Q96TC7 470 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 LTBP2Q14767 1821 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 ELP1O95163 1332 aa17.11■□□□□ 0.33
CCDC38-205ENST00000546947 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC38-205ENST00000546947 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 RXRAP19793 462 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
CCDC38-205ENST00000546947 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
CCDC38-205ENST00000546947 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 SCFD2Q8WU76 684 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
CCDC38-205ENST00000546947 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
CCDC38-205ENST00000546947 CABYRO75952 493 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 MAGEA10P43363 369 aaPredicted RBP17.09■□□□□ 0.33
CCDC38-205ENST00000546947 BEX3Q00994 111 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 STXBP2Q15833 593 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
CCDC38-205ENST00000546947 APOA5Q6Q788 366 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 MICU3Q86XE3 530 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
CCDC38-205ENST00000546947 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 CEP290O15078 2479 aa17.09■□□□□ 0.33
CCDC38-205ENST00000546947 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-205ENST00000546947 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
CCDC38-205ENST00000546947 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 ANKRD33Q7Z3H0 272 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 PIBF1Q8WXW3 757 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
CCDC38-205ENST00000546947 TOX2Q96NM4 488 aa17.08■□□□□ 0.32
CCDC38-205ENST00000546947 A0A0U1RQG5 324 aaPredicted RBP17.07■□□□□ 0.32
CCDC38-205ENST00000546947 ZBTB43O43298 467 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 NR3C2P08235 984 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 EIF2AK2P19525 551 aaKnown RBP17.07■□□□□ 0.32
CCDC38-205ENST00000546947 CPT1AP50416 773 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 RCAN1P53805 252 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 TLE2Q04725 743 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 RAB11FIP4Q86YS3 637 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 OR6J1Q8NGC5 347 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 VTI1AQ96AJ9 217 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 LBHD1Q9BQE6 289 aaPredicted RBP17.07■□□□□ 0.32
CCDC38-205ENST00000546947 PDCD2LQ9BRP1 358 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 PDLIM7Q9NR12 457 aa17.07■□□□□ 0.32
CCDC38-205ENST00000546947 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 ARVCFO00192 962 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 PQBP1O60828 265 aaKnown RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 CLTBP09497 229 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 PTGS1P23219 599 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 PSMA5P28066 241 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 HOXA13P31271 388 aaPredicted RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 CDK7P50613 346 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 FGD1P98174 961 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 CMTR1Q8N1G2 835 aaKnown RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 SEZ6LQ9BYH1 1024 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
CCDC38-205ENST00000546947 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
CCDC38-205ENST00000546947 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 ARIH2O95376 493 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
CCDC38-205ENST00000546947 PGM5Q15124 567 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 RTN1Q16799 776 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 CXCL17Q6UXB2 119 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 Q6ZUG5 572 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 CUL5Q93034 780 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
CCDC38-205ENST00000546947 UBE2OQ9C0C9 1292 aaKnown RBP17.05■□□□□ 0.32
CCDC38-205ENST00000546947 RANBP2P49792 3224 aaKnown RBP17.05■□□□□ 0.32
CCDC38-205ENST00000546947 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 CNTNAP5Q8WYK1 1306 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 GOLGA8AA7E2F4 631 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 CPA1P15085 419 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC38-205ENST00000546947 FAAP100Q0VG06 881 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms