RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C19orf47Q8N9M1 422 aaKnown RBP7.2□□□□□ -1.26
CCDC38-204ENST00000546816 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
CCDC38-204ENST00000546816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC38-204ENST00000546816 PCDHB10Q9UN67 800 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 PPM1BO75688 479 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 PAMP19021 973 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 AMPD2Q01433 879 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 SMAD4Q13485 552 aaKnown RBP7.19□□□□□ -1.26
CCDC38-204ENST00000546816 CCDC81Q6ZN84 652 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 KLHL6Q8WZ60 621 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 FGD4Q96M96 766 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 GORASP1Q9BQQ3 440 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 C1QTNF3Q9BXJ4 246 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 GINM1Q9NU53 330 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 SIT1Q9Y3P8 196 aa7.19□□□□□ -1.26
CCDC38-204ENST00000546816 TRBV23OR9-2A0A075B6M9 112 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 NPHP3-ACAD11A0A0J9YXS1 232 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 A0A1W2PQH9 124 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 MATN3O15232 486 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 PLATP00750 562 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 NTRK1P04629 796 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 GIPRP48546 466 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 SLC7A5Q01650 507 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 PAK2Q13177 524 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-204ENST00000546816 ADAT2Q7Z6V5 191 aaKnown RBP7.18□□□□□ -1.26
CCDC38-204ENST00000546816 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 TTC9BQ8N6N2 239 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 ZNF513Q8N8E2 541 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-204ENST00000546816 SAMD11Q96NU1 681 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
CCDC38-204ENST00000546816 C11orf84Q9BUA3 381 aaPredicted RBP7.18□□□□□ -1.26
CCDC38-204ENST00000546816 SMARCA5O60264 1052 aaPredicted RBP7.17□□□□□ -1.26
CCDC38-204ENST00000546816 NPHS1O60500 1241 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 CYP2C8P10632 490 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 RPL13P26373 211 aaKnown RBP7.17□□□□□ -1.26
CCDC38-204ENST00000546816 THBS2P35442 1172 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 SOX9P48436 509 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 CPZQ66K79 652 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 PLEKHO2Q8TD55 490 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 MRRFQ96E11 262 aaKnown RBP7.17□□□□□ -1.26
CCDC38-204ENST00000546816 SYT3Q9BQG1 590 aa7.17□□□□□ -1.26
CCDC38-204ENST00000546816 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
CCDC38-204ENST00000546816 AKAP8O43823 692 aaKnown RBP7.16□□□□□ -1.26
CCDC38-204ENST00000546816 FUCA1P04066 466 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 EIF6P56537 245 aaKnown RBP7.16□□□□□ -1.26
CCDC38-204ENST00000546816 ZXDAP98168 799 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 HDLBPQ00341 1268 aaKnown RBP7.16□□□□□ -1.26
CCDC38-204ENST00000546816 MBLAC2Q68D91 279 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 DPF3Q92784 378 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 SSBP3Q9BWW4 388 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-204ENST00000546816 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
CCDC38-204ENST00000546816 UNCXA6NJT0 531 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 RBM10P98175 930 aaKnown RBP7.15□□□□□ -1.26
CCDC38-204ENST00000546816 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 FAM26FQ5R3K3 315 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 MIB1Q86YT6 1006 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 KYQ8NBH2 561 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 COPS5Q92905 334 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 MMP19Q99542 508 aa7.15□□□□□ -1.26
CCDC38-204ENST00000546816 ZNF20P17024 532 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 C9orf131Q5VYM1 1079 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 ETV3LQ6ZN32 361 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 DCP2Q8IU60 420 aaKnown RBP7.14□□□□□ -1.27
CCDC38-204ENST00000546816 FAM26EQ8N5C1 309 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 OR6P1Q8NGX9 317 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 RASGRP4Q8TDF6 673 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 C8orf49Q96NF6 230 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 CLEC1BQ9P126 229 aa7.14□□□□□ -1.27
CCDC38-204ENST00000546816 SGSM2O43147 1006 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 LOXL4Q96JB6 756 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 EFR3BQ9Y2G0 817 aa7.13□□□□□ -1.27
CCDC38-204ENST00000546816 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.13□□□□□ -1.27
CCDC38-204ENST00000546816 MROH6A6NGR9 719 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 PLS3P13797 630 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 LGI4Q8N135 537 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 TTLL6Q8N841 843 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 GPRASP2Q96D09 838 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 MARCH2Q9P0N8 246 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 APEX2Q9UBZ4 518 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 AKT3Q9Y243 479 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 SUGT1Q9Y2Z0 365 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 EMC9Q9Y3B6 208 aa7.12□□□□□ -1.27
CCDC38-204ENST00000546816 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 GJA8P48165 433 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 ITGA1P56199 1179 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 SCRN1Q12765 414 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 CD300LDQ6UXZ3 194 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 GPRC5CQ9NQ84 441 aa7.11□□□□□ -1.27
CCDC38-204ENST00000546816 KCNH1O95259 989 aa7.1□□□□□ -1.27
CCDC38-204ENST00000546816 SLC6A11P48066 632 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms