RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PHF20L1A8MW92 1017 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 POTECB2RU33 542 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 PPP1R3GB7ZBB8 358 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 PSMC6P62333 389 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 STK4Q13043 487 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 TPD52L1Q16890 204 aaPredicted RBP13.47□□□□□ -0.25
CCDC38-202ENST00000546386 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 SH3RF1Q7Z6J0 888 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
CCDC38-202ENST00000546386 FAM170AA1A519 330 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 SPDYE3A6NKU9 549 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 NFIBO00712 420 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 SKILP12757 684 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 ZNF76P36508 570 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 CDK5RAP3Q96JB5 506 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 TMX2Q9Y320 296 aa13.46□□□□□ -0.25
CCDC38-202ENST00000546386 POTEFA5A3E0 1075 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 FLOT1O75955 427 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 POTEIP0CG38 1075 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 ALAS1P13196 640 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 ARHGAP4P98171 946 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 GRB10Q13322 594 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 CEP135Q66GS9 1140 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.26
CCDC38-202ENST00000546386 NCAPH2Q6IBW4 605 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 POTEGQ6S5H5 508 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 DCAF4Q8WV16 495 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 MTMR9Q96QG7 549 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 ARID3AQ99856 593 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 RGL1Q9NZL6 768 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.26
CCDC38-202ENST00000546386 HTTP42858 3142 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 BMP15O95972 392 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 CLK2P49760 499 aaKnown RBP13.45□□□□□ -0.26
CCDC38-202ENST00000546386 HMGCS2P54868 508 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 FAM177A1Q8N128 213 aaPredicted RBP13.45□□□□□ -0.26
CCDC38-202ENST00000546386 PNMA5Q96PV4 448 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 FGFBP2Q9BYJ0 223 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 PGAP2Q9UHJ9 254 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 MYH7BA7E2Y1 1941 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC38-202ENST00000546386 PDE4DQ08499 809 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 GALNT17Q6IS24 598 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 NELFBQ8WX92 580 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 ZNF646O15015 1829 aaPredicted RBP13.45□□□□□ -0.26
CCDC38-202ENST00000546386 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
CCDC38-202ENST00000546386 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 IGSF3O75054 1194 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 GMCL1P1Q8NEA9 526 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 SPATA20Q8TB22 786 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 PIGOQ8TEQ8 1089 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 VCPKMTQ9H867 229 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 TAB2Q9NYJ8 693 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
CCDC38-202ENST00000546386 MYMKA6NI61 221 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 PLS1Q14651 629 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 NT5DC1Q5TFE4 455 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 BLOC1S4Q9NUP1 217 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 ABCB11O95342 1321 aa13.44□□□□□ -0.26
CCDC38-202ENST00000546386 H7C1D1 291 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 FZD9O00144 591 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 ASNSP08243 561 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 SP4Q02446 784 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 KANK3Q6NY19 840 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 KIAA1524Q8TCG1 905 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 ZBED3Q96IU2 234 aaPredicted RBP13.43□□□□□ -0.26
CCDC38-202ENST00000546386 RIPK3Q9Y572 518 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 MED24O75448 989 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 TPM4P67936 248 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC38-202ENST00000546386 IGSF22Q8N9C0 903 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 MLKLQ8NB16 471 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 TRIM9Q9C026 710 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 COL20A1Q9P218 1284 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
CCDC38-202ENST00000546386 GTPBP6O43824 516 aaPredicted RBP13.42□□□□□ -0.26
CCDC38-202ENST00000546386 CAPN15O75808 1086 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 CAVIN2O95810 425 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 CTTNQ14247 550 aaKnown RBP13.42□□□□□ -0.26
CCDC38-202ENST00000546386 SARM1Q6SZW1 724 aa13.42□□□□□ -0.26
CCDC38-202ENST00000546386 NSMFQ6X4W1 530 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms