RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
UBR1-202ENST00000546274 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
UBR1-202ENST00000546274 CLTAP09496 248 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PLCD1P51178 756 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 FUT2Q10981 343 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PPP1R7Q15435 360 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 MSL1Q68DK7 614 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 MAEAQ7L5Y9 396 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 ZNF654Q8IZM8 581 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 FANCBQ8NB91 859 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 CCT8L2Q96SF2 557 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 NAPGQ99747 312 aaPredicted RBP8.72□□□□□ -1.01
UBR1-202ENST00000546274 SH3GL2Q99962 352 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 ERICH2A1L162 156 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 ENC1O14682 589 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 BACH1O14867 736 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 DIAPH2O60879 1101 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 LINGO3P0C6S8 592 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 SLC5A1P13866 664 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PBX1P40424 430 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 CTCFP49711 727 aaPredicted RBP8.72□□□□□ -1.01
UBR1-202ENST00000546274 BCAMP50895 628 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 RCAN1P53805 252 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 APBA1Q02410 837 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 CUL4BQ13620 913 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 SUSD4Q5VX71 490 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 DZIP3Q86Y13 1208 aaKnown RBP8.72□□□□□ -1.01
UBR1-202ENST00000546274 MFN1Q8IWA4 741 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 TRIM22Q8IYM9 498 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 RRP36Q96EU6 259 aaKnown RBP8.72□□□□□ -1.01
UBR1-202ENST00000546274 MTA3Q9BTC8 594 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 TEX33O43247 280 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 RNF8O76064 485 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 USP14P54578 494 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 KRT27Q7Z3Y8 459 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 EPSTI1Q96J88 318 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PHACTR1Q9C0D0 580 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 CABP5Q9NP86 173 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 C15orf41Q9Y2V0 281 aa8.72□□□□□ -1.01
UBR1-202ENST00000546274 KIAA1551Q9HCM1 1747 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 SRGAP2O75044 1071 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 ATP6V1G2O95670 118 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 GNAT2P19087 354 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 ERCC5P28715 1186 aaPredicted RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 CASP1P29466 404 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 TUBB4BP68371 445 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 ROR2Q01974 943 aaKnown RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 PPARAQ07869 468 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 SAFBQ15424 915 aaKnown RBP eCLIP8.71□□□□□ -1.01
UBR1-202ENST00000546274 NPY5RQ15761 445 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 CDKAL1Q5VV42 579 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 ARMC9Q7Z3E5 817 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 YTHDF3Q7Z739 585 aaKnown RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 MIGA1Q8NAN2 632 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 PROCA1Q8NCQ7 364 aaPredicted RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 ZNF570Q96NI8 536 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 MTRQ99707 1265 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 PHF20Q9BVI0 1012 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 EPN3Q9H201 632 aa8.71□□□□□ -1.01
UBR1-202ENST00000546274 AATFQ9NY61 560 aaKnown RBP eCLIP8.71□□□□□ -1.01
UBR1-202ENST00000546274 CORO1CQ9ULV4 474 aaPredicted RBP8.71□□□□□ -1.01
UBR1-202ENST00000546274 IL6STP40189 918 aaPredicted RBP8.71□□□□□ -1.02
UBR1-202ENST00000546274 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.02
UBR1-202ENST00000546274 RAD9BQ6WBX8 426 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 NLRP14Q86W24 1093 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 MAGEC3Q8TD91 643 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 NOC3LQ8WTT2 800 aaKnown RBP8.71□□□□□ -1.02
UBR1-202ENST00000546274 CUL5Q93034 780 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 TNFRSF25Q93038 417 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.02
UBR1-202ENST00000546274 HDAC6Q9UBN7 1215 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
UBR1-202ENST00000546274 ATXN2Q99700 1313 aaKnown RBP8.71□□□□□ -1.02
UBR1-202ENST00000546274 B4DLN1 442 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 GOLGA8KD6RF30 607 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 PDIA5Q14554 519 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 CCDC178Q5BJE1 867 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 ACBD5Q5T8D3 534 aaPredicted RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 TRIM68Q6AZZ1 485 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 RINLQ6ZS11 566 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 SDR42E1Q8WUS8 393 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 ACSBG1Q96GR2 724 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 RNF26Q9BY78 433 aaPredicted RBP8.7□□□□□ -1.02
UBR1-202ENST00000546274 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 VPS54Q9P1Q0 977 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 DACH1Q9UI36 760 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 TNKSO95271 1327 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 MYH1P12882 1939 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 OPA1O60313 960 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 KRT14P02533 472 aa8.7□□□□□ -1.02
UBR1-202ENST00000546274 FERP16591 822 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms