RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 CNNM4Q6P4Q7 775 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
CNN3-207ENST00000545882 CCDC102AQ96A19 550 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 RRP36Q96EU6 259 aaKnown RBP17.02■□□□□ 0.32
CNN3-207ENST00000545882 RPGRIP1Q96KN7 1286 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.32
CNN3-207ENST00000545882 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 MACROD2A1Z1Q3 448 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 MYBL2P10244 700 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 TXKP42681 527 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 AMPD3Q01432 767 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 CKAP4Q07065 602 aaKnown RBP17.02■□□□□ 0.31
CNN3-207ENST00000545882 GRAPQ13588 217 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 VWA3BQ502W6 1294 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 GRAPLQ8TC17 118 aaPredicted RBP17.02■□□□□ 0.31
CNN3-207ENST00000545882 CEP95Q96GE4 821 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.31
CNN3-207ENST00000545882 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 GPR75-ASB3A0A0A6YYF3 556 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 ESYT2A0FGR8 921 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 PHACTR2O75167 634 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 ZMYND10O75800 440 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
CNN3-207ENST00000545882 IDEP14735 1019 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
CNN3-207ENST00000545882 FKBP15Q5T1M5 1219 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 C15orf52Q6ZUT6 534 aaKnown RBP17.01■□□□□ 0.31
CNN3-207ENST00000545882 CALML4Q96GE6 196 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 RIOX1Q9H6W3 641 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 MED4Q9NPJ6 270 aa17.01■□□□□ 0.31
CNN3-207ENST00000545882 RPS6KA5O75582 802 aa17■□□□□ 0.31
CNN3-207ENST00000545882 LCA5LO95447 670 aa17■□□□□ 0.31
CNN3-207ENST00000545882 RFC4P35249 363 aa17■□□□□ 0.31
CNN3-207ENST00000545882 UNC13DQ70J99 1090 aa17■□□□□ 0.31
CNN3-207ENST00000545882 SV2BQ7L1I2 683 aa17■□□□□ 0.31
CNN3-207ENST00000545882 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
CNN3-207ENST00000545882 CREG2Q8IUH2 290 aa17■□□□□ 0.31
CNN3-207ENST00000545882 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
CNN3-207ENST00000545882 SECISBP2LQ93073 1101 aaKnown RBP17■□□□□ 0.31
CNN3-207ENST00000545882 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
CNN3-207ENST00000545882 NDST4Q9H3R1 872 aa17■□□□□ 0.31
CNN3-207ENST00000545882 CAPN6Q9Y6Q1 641 aa17■□□□□ 0.31
CNN3-207ENST00000545882 SLC37A4O43826 429 aa17■□□□□ 0.31
CNN3-207ENST00000545882 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
CNN3-207ENST00000545882 RHBDL3P58872 404 aa17■□□□□ 0.31
CNN3-207ENST00000545882 C2orf54Q08AI8 447 aa17■□□□□ 0.31
CNN3-207ENST00000545882 KIF5AQ12840 1032 aa17■□□□□ 0.31
CNN3-207ENST00000545882 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
CNN3-207ENST00000545882 SOGA3Q5TF21 947 aa17■□□□□ 0.31
CNN3-207ENST00000545882 CCNI2Q6ZMN8 369 aaPredicted RBP17■□□□□ 0.31
CNN3-207ENST00000545882 GSPT2Q8IYD1 628 aaKnown RBP17■□□□□ 0.31
CNN3-207ENST00000545882 CCDC42Q96M95 316 aa17■□□□□ 0.31
CNN3-207ENST00000545882 SH2D4AQ9H788 454 aa17■□□□□ 0.31
CNN3-207ENST00000545882 MLXIPQ9HAP2 919 aa17■□□□□ 0.31
CNN3-207ENST00000545882 PCDHA13Q9Y5I0 950 aa17■□□□□ 0.31
CNN3-207ENST00000545882 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
CNN3-207ENST00000545882 TDP2O95551 362 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 MCM3P25205 808 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 HSP90B2PQ58FF3 399 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 COG1Q8WTW3 980 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
CNN3-207ENST00000545882 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
CNN3-207ENST00000545882 LCMT1Q9UIC8 334 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 ATAD5Q96QE3 1844 aa16.99■□□□□ 0.31
CNN3-207ENST00000545882 EIF4A3P38919 411 aaKnown RBP16.98■□□□□ 0.31
CNN3-207ENST00000545882 GPSM2P81274 684 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 EHHADHQ08426 723 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 CALCRLQ16602 461 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 MAN2A1Q16706 1144 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 FOXR1Q6PIV2 292 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 LRRC55Q6ZSA7 311 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 ZNF572Q7Z3I7 529 aaPredicted RBP16.98■□□□□ 0.31
CNN3-207ENST00000545882 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 GUF1Q8N442 669 aaKnown RBP16.98■□□□□ 0.31
CNN3-207ENST00000545882 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 GLIS3Q8NEA6 775 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 BAP1Q92560 729 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 COA7Q96BR5 231 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
CNN3-207ENST00000545882 TSGA10Q9BZW7 698 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 ACBD3Q9H3P7 528 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 FAM204AQ9H8W3 233 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 CD209Q9NNX6 404 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 FAM207AQ9NSI2 230 aaPredicted RBP16.98■□□□□ 0.31
CNN3-207ENST00000545882 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
CNN3-207ENST00000545882 TMEM51Q9NW97 253 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms