RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 NAT2P11245 290 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 DYNC1I2Q13409 638 aaKnown RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ANKRD1Q15327 319 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ACCSLQ4AC99 568 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 CCDC92Q53HC0 331 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 NUGGCQ68CJ6 796 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 SYCP3Q8IZU3 236 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 RASSF8Q8NHQ8 419 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 BCAS4Q8TDM0 211 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 TGFBRAP1Q8WUH2 860 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 PHKBQ93100 1093 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 DYNLL2Q96FJ2 89 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 BRIP1Q9BX63 1249 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ZSWIM5Q9P217 1185 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 C15orf41Q9Y2V0 281 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ASB3Q9Y575 518 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 TNRC6CQ9HCJ0 1690 aaKnown RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 H0YIN7 160 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 DESP17661 470 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 BAG6P46379 1132 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 TUBB4BP68371 445 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 PPFIA1Q13136 1202 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 CUL4BQ13620 913 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 CRELD2Q6UXH1 353 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 SH3RF3Q8TEJ3 882 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 NSMCE1Q8WV22 266 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 LEO1Q8WVC0 666 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 TAF4BQ92750 862 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 CAMKK2Q96RR4 588 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 NUP58Q9BVL2 599 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 UBE2OQ9C0C9 1292 aaKnown RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ACTR5Q9H9F9 607 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ABCB6Q9NP58 842 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 ITM2BQ9Y287 266 aa7.41□□□□□ -1.22
NECAP1-208ENST00000545807 PTPDC1A2A3K4 754 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 BBOX1O75936 387 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 TUBBP07437 444 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 PDIA3P30101 505 aaKnown RBP7.4□□□□□ -1.22
NECAP1-208ENST00000545807 CACNB3P54284 484 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 EXOSC10Q01780 885 aaKnown RBP7.4□□□□□ -1.22
NECAP1-208ENST00000545807 CACNB1Q02641 598 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-208ENST00000545807 PPARAQ07869 468 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 E2F5Q15329 346 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 OLFML1Q6UWY5 402 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 GBP7Q8N8V2 638 aaPredicted RBP7.4□□□□□ -1.22
NECAP1-208ENST00000545807 SLC44A5Q8NCS7 719 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 ARHGEF10LQ9HCE6 1279 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 C4AP0C0L4 1744 aa7.4□□□□□ -1.22
NECAP1-208ENST00000545807 LY75O60449 1722 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 ABLIM1O14639 778 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 MMEP08473 750 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 ZSCAN22P10073 491 aaPredicted RBP7.4□□□□□ -1.23
NECAP1-208ENST00000545807 ATP4AP20648 1035 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 CRY2Q49AN0 593 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 GALNT17Q6IS24 598 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 MB21D2Q8IYB1 491 aaPredicted RBP7.4□□□□□ -1.23
NECAP1-208ENST00000545807 IGSF22Q8N9C0 903 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 CNKSR1Q969H4 720 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 NUP62CLQ9H1M0 184 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 WDR35Q9P2L0 1181 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 HOOK1Q9UJC3 728 aaKnown RBP7.4□□□□□ -1.23
NECAP1-208ENST00000545807 MTMR6Q9Y217 621 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 LEMD3Q9Y2U8 911 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 PCDHAC2Q9Y5I4 1007 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 N6AMT1Q9Y5N5 214 aa7.4□□□□□ -1.23
NECAP1-208ENST00000545807 UBR3Q6ZT12 1888 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 MYH13Q9UKX3 1938 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 A6NNZ2 444 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 LRRIQ3A6PVS8 624 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 PHACTR2O75167 634 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 NPTXRO95502 500 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 IBSPP21815 317 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 ZNF165P49910 485 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 TUBB8Q3ZCM7 444 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 PACS1Q6VY07 963 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 LCA5Q86VQ0 697 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 RNF168Q8IYW5 571 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 LZICQ8WZA0 190 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 MPHOSPH6Q99547 160 aaKnown RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 SH3GL2Q99962 352 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 RIOK1Q9BRS2 568 aaKnown RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 FTOQ9C0B1 505 aaKnown RBP eCLIP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 PCMTD2Q9NV79 361 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 BZW2Q9Y6E2 419 aaKnown RBP7.39□□□□□ -1.23
NECAP1-208ENST00000545807 RFX7Q2KHR2 1363 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 BCORQ6W2J9 1755 aa7.39□□□□□ -1.23
NECAP1-208ENST00000545807 RAD21O60216 631 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms