RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	CYP2C9	P11712	490 aa		27.81	■■■□□ 2.04
RAP1B-233	ENST00000545720	BRDT	Q58F21	947 aa	Predicted RBP	27.81	■■■□□ 2.04
RAP1B-233	ENST00000545720	ENAH	Q8N8S7	591 aa	Predicted RBP	27.81	■■■□□ 2.04
RAP1B-233	ENST00000545720	SCLY	Q96I15	445 aa		27.81	■■■□□ 2.04
RAP1B-233	ENST00000545720	TNKS	O95271	1327 aa		27.81	■■■□□ 2.04
RAP1B-233	ENST00000545720		B4DLN1	442 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	MRPL12	P52815	198 aa	Known RBP	27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	ASPRV1	Q53RT3	343 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	FAM47C	Q5HY64	1035 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	ADGRF4	Q8IZF3	695 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	PPP1R13L	Q8WUF5	828 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	ANKS1A	Q92625	1134 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	ZSWIM5	Q9P217	1185 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	ABCB11	O95342	1321 aa		27.8	■■■□□ 2.04
RAP1B-233	ENST00000545720	CHD7	Q9P2D1	2997 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	DHX16	O60231	1041 aa	Known RBP	27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	SUPT20HL2	P0C7V6	817 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	TXN	P10599	105 aa	Known RBP	27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	RAB30	Q15771	203 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	USP38	Q8NB14	1042 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	RGS22	Q8NE09	1264 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	TBC1D5	Q92609	795 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	CTNNA3	Q9UI47	895 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	MSRA	Q9UJ68	235 aa		27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.79	■■■□□ 2.04
RAP1B-233	ENST00000545720	ARIH2	O95376	493 aa		27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	TTLL4	Q14679	1199 aa		27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	NBPF20	Q3BBV1	942 aa		27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	RPUSD2	Q8IZ73	545 aa	Known RBP	27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	TET1	Q8NFU7	2136 aa		27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	GAS2L1	Q99501	681 aa	Predicted RBP	27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	PRDM12	Q9H4Q4	367 aa		27.78	■■■□□ 2.04
RAP1B-233	ENST00000545720	PARP1	P09874	1014 aa	Known RBP	27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	QRICH1	Q2TAL8	776 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	UBAC1	Q9BSL1	405 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	KRT23	Q9C075	422 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	IL25	Q9H293	177 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	NKX2-4	Q9H2Z4	354 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720	COL20A1	Q9P218	1284 aa		27.77	■■■□□ 2.04
RAP1B-233	ENST00000545720		A6NJR5	290 aa		27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	VWCE	Q96DN2	955 aa		27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	TAAR1	Q96RJ0	339 aa		27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	CNNM2	Q9H8M5	875 aa		27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	VAT1L	Q9HCJ6	419 aa		27.76	■■■□□ 2.03
RAP1B-233	ENST00000545720	ZBBX	A8MT70	800 aa		27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	KPNA6	O60684	536 aa		27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	SEPT14	Q6ZU15	432 aa		27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	FBXO11	Q86XK2	927 aa		27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	YBX2	Q9Y2T7	364 aa	Known RBP	27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	SLC4A7	Q9Y6M7	1214 aa		27.75	■■■□□ 2.03
RAP1B-233	ENST00000545720	RABGGTB	P53611	331 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	CHMP4BP1	P59074	171 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	NFRKB	Q6P4R8	1299 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	DEFB128	Q7Z7B8	93 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	MCF2L2	Q86YR7	1114 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	NSUN6	Q8TEA1	469 aa	Known RBP	27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	JMJD4	Q9H9V9	463 aa		27.74	■■■□□ 2.03
RAP1B-233	ENST00000545720	TTC28	Q96AY4	2481 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	IFIT1B	Q5T764	474 aa	Known RBP	27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	CCDC62	Q6P9F0	684 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	PPM1E	Q8WY54	764 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	RMDN3	Q96TC7	470 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	MAF1	Q9H063	256 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	SLC28A3	Q9HAS3	691 aa		27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	MRPL11	Q9Y3B7	192 aa	Known RBP	27.73	■■■□□ 2.03
RAP1B-233	ENST00000545720	PFKM	P08237	780 aa		27.72	■■■□□ 2.03
RAP1B-233	ENST00000545720	LY6K	Q17RY6	165 aa		27.72	■■■□□ 2.03
RAP1B-233	ENST00000545720	STAG2	Q8N3U4	1231 aa		27.72	■■■□□ 2.03
RAP1B-233	ENST00000545720	AFG1L	Q8WV93	481 aa		27.72	■■■□□ 2.03
RAP1B-233	ENST00000545720	PTPRS	Q13332	1948 aa		27.72	■■■□□ 2.03
RAP1B-233	ENST00000545720	SPTBN5	Q9NRC6	3674 aa	Known RBP	27.71	■■■□□ 2.03
RAP1B-233	ENST00000545720	GH1	P01241	217 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	MMP3	P08254	477 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	GSPT1	P15170	499 aa	Known RBP	27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	MYOG	P15173	224 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	EIF2AK2	P19525	551 aa	Known RBP	27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	PDE4A	P27815	886 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	PTPN11	Q06124	597 aa	Predicted RBP	27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	ARHGAP1	Q07960	439 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	STXBP2	Q15833	593 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	ARHGEF16	Q5VV41	709 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	CYB5R4	Q7L1T6	521 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	CHST3	Q7LGC8	479 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	IWS1	Q96ST2	819 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	PRDM6	Q9NQX0	595 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	NOD1	Q9Y239	953 aa		27.7	■■■□□ 2.02
RAP1B-233	ENST00000545720	CFB	P00751	764 aa		27.69	■■■□□ 2.02
RAP1B-233	ENST00000545720	ATP2A2	P16615	1042 aa	Known RBP	27.69	■■■□□ 2.02
RAP1B-233	ENST00000545720	ADGRE1	Q14246	886 aa		27.69	■■■□□ 2.02
RAP1B-233	ENST00000545720	SEC23A	Q15436	765 aa		27.69	■■■□□ 2.02
RAP1B-233	ENST00000545720	TTC22	Q5TAA0	569 aa		27.69	■■■□□ 2.02
RAP1B-233	ENST00000545720	KLRF2	D3W0D1	207 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	PITPNM1	O00562	1244 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	IGFBP4	P22692	258 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	PPP2R2D	Q66LE6	453 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	RETREG2	Q8NC44	543 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	AMN	Q9BXJ7	453 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	PXMP2	Q9NR77	195 aa		27.68	■■■□□ 2.02
RAP1B-233	ENST00000545720	PCDHA11	Q9Y5I1	949 aa		27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms