RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 MORC2Q9Y6X9 1032 aaPredicted RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 ENC1O14682 589 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 FLOT1O75955 427 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 ICA1Q05084 483 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 PAK2Q13177 524 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 UBE2SQ16763 222 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 FBXO11Q86XK2 927 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 CEP57Q86XR8 500 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 STAG2Q8N3U4 1231 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 RAD54LQ92698 747 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 ARHGEF1Q92888 912 aaKnown RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 STMN4Q9H169 189 aaPredicted RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 PDE11AQ9HCR9 933 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS50-220ENST00000544910 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 DHX37Q8IY37 1157 aaKnown RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 CTNNBL1Q8WYA6 563 aaPredicted RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 CCDC17Q96LX7 622 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 NAP1L3Q99457 506 aaPredicted RBP6.38□□□□□ -1.39
VPS50-220ENST00000544910 ZBTB21Q9ULJ3 1066 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 KCPQ6ZWJ8 1503 aa6.38□□□□□ -1.39
VPS50-220ENST00000544910 ARHGEF35A5YM69 484 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 GOLGA8KD6RF30 607 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 UBE2Q2LH0YL09 131 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 TOB1P50616 345 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 LRRC63Q05C16 580 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 ADAM9Q13443 819 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 KCNB1Q14721 858 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 NAA30Q147X3 362 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 DNAJC21Q5F1R6 531 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 SEL1L2Q5TEA6 688 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 TRMT1LQ7Z2T5 733 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 PSMB7Q99436 277 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 MED4Q9NPJ6 270 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 PKD2L1Q9P0L9 805 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 COL4A3BPQ9Y5P4 624 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 ADGRG1Q9Y653 693 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 RGPD5Q99666 1765 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 TCP1P17987 556 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 SLC16A2P36021 539 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 GRIN1Q05586 938 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 LRRC41Q15345 812 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 RPS6KA1Q15418 735 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 CCDC155Q8N6L0 562 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 UBLCP1Q8WVY7 318 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 COA1Q9GZY4 146 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 NBPF3Q9H094 633 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 PDS5AQ29RF7 1337 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 MAP2K2P36507 400 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 C2orf54Q08AI8 447 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 COL9A3Q14050 684 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 CLUL1Q15846 466 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 SND1Q7KZF4 910 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS50-220ENST00000544910 ADGRA1Q86SQ6 560 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 SLC44A5Q8NCS7 719 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 CCDC114Q96M63 670 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 CD209Q9NNX6 404 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 FAM184BQ9ULE4 1060 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 UTP11Q9Y3A2 253 aaKnown RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 PCDHA1Q9Y5I3 950 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 A0A1W2PQC6 194 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 CCDC151A5D8V7 595 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 STAMBPO95630 424 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 ARHGAP25P42331 645 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 RASSF7Q02833 373 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 ABCB5Q2M3G0 1257 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 TPH2Q8IWU9 490 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 TC2NQ8N9U0 490 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 DCAF4Q8WV16 495 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 EXOC7Q9UPT5 735 aa6.37□□□□□ -1.39
VPS50-220ENST00000544910 TRPM3Q9HCF6 1732 aaPredicted RBP6.37□□□□□ -1.39
VPS50-220ENST00000544910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 MOCS3O95396 460 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CFBP00751 764 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 FOSP01100 380 aaPredicted RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 POLR2MP0CAP2 368 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CEP95Q96GE4 821 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 SPZ1Q9BXG8 430 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 NDST4Q9H3R1 872 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 TMEM260Q9NX78 707 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 SERPINB13Q9UIV8 391 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 PPP1R3GB7ZBB8 358 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 DDX39AO00148 427 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 STXBP3O00186 592 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 RNASE9P60153 205 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 CC2D1AQ6P1N0 951 aaPredicted RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 KLHL7Q8IXQ5 586 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 CEP63Q96MT8 703 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 RIOK1Q9BRS2 568 aaKnown RBP6.36□□□□□ -1.39
VPS50-220ENST00000544910 AMNQ9BXJ7 453 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 MAD2L2Q9UI95 211 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 SERPING1P05155 500 aa6.36□□□□□ -1.39
VPS50-220ENST00000544910 ADRA2BP18089 450 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms