RNA–Protein interactions for RNA: ENST00000544777.1

KDM5A-211, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-211ENST00000544777 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
KDM5A-211ENST00000544777 SAMD11Q96NU1 681 aa12.15□□□□□ -0.46
KDM5A-211ENST00000544777 NSUN3Q9H649 340 aaKnown RBP12.15□□□□□ -0.46
KDM5A-211ENST00000544777 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
KDM5A-211ENST00000544777 ARPP21Q9UBL0 812 aaPredicted RBP12.15□□□□□ -0.46
KDM5A-211ENST00000544777 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
KDM5A-211ENST00000544777 USP34Q70CQ2 3546 aa12.15□□□□□ -0.47
KDM5A-211ENST00000544777 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 ZBED9Q6R2W3 1325 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 RIF1Q5UIP0 2472 aaKnown RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 CFAP54Q96N23 3096 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 NCK2O43639 380 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 GPM6BQ13491 265 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 SMAD2Q15796 467 aaKnown RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 EPC2Q52LR7 807 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 FAM160B2Q86V87 743 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 ATOH1Q92858 354 aaPredicted RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
KDM5A-211ENST00000544777 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
KDM5A-211ENST00000544777 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 H3BNC9 293 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 NBNO60934 754 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 COL19A1Q14993 1142 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 ERMP1Q7Z2K6 904 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
KDM5A-211ENST00000544777 LRRC47Q8N1G4 583 aaKnown RBP12.13□□□□□ -0.47
KDM5A-211ENST00000544777 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
KDM5A-211ENST00000544777 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.13□□□□□ -0.47
KDM5A-211ENST00000544777 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
KDM5A-211ENST00000544777 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 A6NJR5 290 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 STXBP3O00186 592 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 MBTPS2O43462 519 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 TTLL1O95922 423 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 AMHP03971 560 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 CKBP12277 381 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 ALDH5A1P51649 535 aaPredicted RBP12.12□□□□□ -0.47
KDM5A-211ENST00000544777 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
KDM5A-211ENST00000544777 CLUL1Q15846 466 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 GDF6Q6KF10 455 aaPredicted RBP12.12□□□□□ -0.47
KDM5A-211ENST00000544777 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 CEP95Q96GE4 821 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 EXOC6BQ9Y2D4 811 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 TRIOO75962 3097 aa12.12□□□□□ -0.47
KDM5A-211ENST00000544777 MINDY4BA8MYZ0 360 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 LTBRP36941 435 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 SLC1A4P43007 532 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 HTRA4P83105 476 aaPredicted RBP12.11□□□□□ -0.47
KDM5A-211ENST00000544777 RBL2Q08999 1139 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
KDM5A-211ENST00000544777 TMEM192Q8IY95 271 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
KDM5A-211ENST00000544777 DHX38Q92620 1227 aaKnown RBP12.11□□□□□ -0.47
KDM5A-211ENST00000544777 COPS5Q92905 334 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 CCPG1Q9ULG6 757 aa12.11□□□□□ -0.47
KDM5A-211ENST00000544777 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 SNAP25P60880 206 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 ZXDAP98168 799 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 SMAD4Q13485 552 aaKnown RBP12.1□□□□□ -0.47
KDM5A-211ENST00000544777 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
KDM5A-211ENST00000544777 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 SESTD1Q86VW0 696 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 YME1L1Q96TA2 773 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 MPHOSPH6Q99547 160 aaKnown RBP12.1□□□□□ -0.47
KDM5A-211ENST00000544777 CACNA1BQ00975 2339 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
KDM5A-211ENST00000544777 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 PLA2G6O60733 806 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 LGR5O75473 907 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
KDM5A-211ENST00000544777 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
KDM5A-211ENST00000544777 MCCP23508 829 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 PDE4BQ07343 736 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 PDE4DQ08499 809 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
KDM5A-211ENST00000544777 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms