RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MYADML2A6NDP7 307 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 DCDC2CA8MYV0 355 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 ADCY6O43306 1168 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 RAD21O60216 631 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 DUSP11O75319 330 aaKnown RBP7.66□□□□□ -1.18
CDCA3-209ENST00000544610 TIMP1P01033 207 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 DNAJB2P25686 324 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 CUL4AQ13619 759 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 KCNA10Q16322 511 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 SGMS1Q86VZ5 419 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 IQCA1Q86XH1 822 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 MB21D2Q8IYB1 491 aaPredicted RBP7.66□□□□□ -1.18
CDCA3-209ENST00000544610 ANKS1AQ92625 1134 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 DDX11Q96FC9 970 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 FGD4Q96M96 766 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 MAP3K14Q99558 947 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 UPF3AQ9H1J1 476 aaKnown RBP7.66□□□□□ -1.18
CDCA3-209ENST00000544610 SLC38A10Q9HBR0 1119 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 PDRG1Q9NUG6 133 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.66□□□□□ -1.18
CDCA3-209ENST00000544610 ZHX1Q9UKY1 873 aaPredicted RBP7.66□□□□□ -1.18
CDCA3-209ENST00000544610 RIPK3Q9Y572 518 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 ELP1O95163 1332 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 MROH7Q68CQ1 1323 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 NID2Q14112 1375 aa7.66□□□□□ -1.18
CDCA3-209ENST00000544610 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.65□□□□□ -1.18
CDCA3-209ENST00000544610 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.65□□□□□ -1.18
CDCA3-209ENST00000544610 DHX16O60231 1041 aaKnown RBP7.65□□□□□ -1.18
CDCA3-209ENST00000544610 ZBED4O75132 1171 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 RGS20O76081 388 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 FECHP22830 423 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 NOVP48745 357 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 CDK7P50613 346 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 OAZ1P54368 228 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 GJA9P57773 515 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 ACVR2BQ13705 512 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 GRIN2CQ14957 1233 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 ADCK5Q3MIX3 580 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 RASIP1Q5U651 963 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 MFSD5Q6N075 450 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 DGKHQ86XP1 1220 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 CUL9Q8IWT3 2517 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 PCSK9Q8NBP7 692 aaKnown RBP7.65□□□□□ -1.18
CDCA3-209ENST00000544610 GMCL1P1Q8NEA9 526 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 MKL1Q969V6 931 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 GLT1D1Q96MS3 346 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.65□□□□□ -1.183e-7■■■□□ 14.6
CDCA3-209ENST00000544610 LLPHQ9BRT6 129 aaKnown RBP7.65□□□□□ -1.18
CDCA3-209ENST00000544610 KATNBL1Q9H079 304 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 ABHD16BQ9H3Z7 469 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 MKNK2Q9HBH9 465 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 FBXO40Q9UH90 709 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 FEM1BQ9UK73 627 aa7.65□□□□□ -1.18
CDCA3-209ENST00000544610 ZNFX1Q9P2E3 1918 aaKnown RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 A0A0U1RQG5 324 aaPredicted RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ERICH2A1L162 156 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 MINDY4BA8MYZ0 360 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CTAGE5O15320 804 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 TTLL1O95922 423 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ASGR1P07306 291 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 C6orf222P0C671 652 aaPredicted RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 NKX3-2P78367 333 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 PPIGQ13427 754 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■■□ 25.5
CDCA3-209ENST00000544610 CCDC144BQ3MJ40 725 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CCDC174Q6PII3 467 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 STOX1Q6ZVD7 989 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 C16orf59Q7L2K0 433 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ARMCX2Q7L311 632 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 TBC1D10CQ8IV04 446 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 FAM126BQ8IXS8 530 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CCDC144CPQ8IYA2 1237 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CPXCR1Q8N123 301 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 STK11IPQ8N1F8 1099 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ANKRD35Q8N283 1001 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 USP38Q8NB14 1042 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CHST13Q8NET6 341 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 IGDCC4Q8TDY8 1250 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 SYMPKQ92797 1274 aaKnown RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 KIFC2Q96AC6 838 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 TIFAQ96CG3 184 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CEP95Q96GE4 821 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 UPF3BQ9BZI7 483 aaKnown RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 SPC25Q9HBM1 224 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 RAVER2Q9HCJ3 691 aaKnown RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 MTMR4Q9NYA4 1195 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CLIP2Q9UDT6 1046 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.64□□□□□ -1.19
CDCA3-209ENST00000544610 LRRC37A2A6NM11 1700 aa7.64□□□□□ -1.19
CDCA3-209ENST00000544610 CCDC196A0A1B0GTZ2 297 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 ARVCFO00192 962 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PRC1O43663 620 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PRDM1O75626 825 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CD4P01730 458 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CALM1P0DP23 149 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CALM2P0DP24 149 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CALM3P0DP25 149 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 FDX1P10109 184 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms