RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 KANK3Q6NY19 840 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 DYMQ7RTS9 669 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 LDHDQ86WU2 507 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 CTNND2Q9UQB3 1225 aa15.42■□□□□ 0.06
HCFC2-202ENST00000544223 TRIM49BA6NDI0 452 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
HCFC2-202ENST00000544223 FANCCQ00597 558 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 BPIFA3Q9BQP9 254 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 ZNF536O15090 1300 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 SSC5DA1L4H1 1573 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
HCFC2-202ENST00000544223 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
HCFC2-202ENST00000544223 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 RANBP17Q9H2T7 1088 aaKnown RBP15.41■□□□□ 0.06
HCFC2-202ENST00000544223 PCDHA12Q9UN75 941 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 DNAH12Q6ZR08 3092 aa15.41■□□□□ 0.06
HCFC2-202ENST00000544223 MEIS1O00470 390 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 LAD1O00515 517 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 SERPINC1P01008 464 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 FCER1AP12319 257 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 CACTINQ8WUQ7 758 aaKnown RBP15.4■□□□□ 0.06
HCFC2-202ENST00000544223 CCSER1Q9C0I3 900 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
HCFC2-202ENST00000544223 CCPG1Q9ULG6 757 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 ALAS1P13196 640 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 PTPRAP18433 802 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 KMT5BQ4FZB7 885 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 MUM1L1Q5H9M0 696 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 SARM1Q6SZW1 724 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 LENG9Q96B70 501 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 BLOC1S4Q9NUP1 217 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 COL20A1Q9P218 1284 aa15.4■□□□□ 0.06
HCFC2-202ENST00000544223 NPHP3-ACAD11A0A0J9YXS1 232 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 POTEB3A0JP26 581 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 POTECB2RU33 542 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
HCFC2-202ENST00000544223 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
HCFC2-202ENST00000544223 PMS1P54277 932 aaKnown RBP15.39■□□□□ 0.05
HCFC2-202ENST00000544223 POTEBQ6S5H4 581 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 TMC6Q7Z403 805 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 GLIS3Q8NEA6 775 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 CRYGNQ8WXF5 182 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 INTS13Q9NVM9 706 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 E9PMD0 336 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 CHMP2AO43633 222 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 KLRC4O43908 158 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 PRCPP42785 496 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 KBTBD4Q9NVX7 518 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 RIPK3Q9Y572 518 aa15.39■□□□□ 0.05
HCFC2-202ENST00000544223 DICER1Q9UPY3 1922 aaKnown RBP15.38■□□□□ 0.05
HCFC2-202ENST00000544223 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 IKBKBO14920 756 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 KCNA4P22459 653 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ZNF76P36508 570 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 CYP4A11Q02928 519 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ELOA2Q8IYF1 753 aaPredicted RBP15.38■□□□□ 0.05
HCFC2-202ENST00000544223 FAM177A1Q8N128 213 aaPredicted RBP15.38■□□□□ 0.05
HCFC2-202ENST00000544223 MLKLQ8NB16 471 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 IL31RAQ8NI17 732 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ATG4CQ96DT6 458 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 BCAS3Q9H6U6 928 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 FEM1BQ9UK73 627 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ABCB11O95342 1321 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 MYMKA6NI61 221 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ERCC3P19447 782 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 CDK11BP21127 795 aaKnown RBP15.38■□□□□ 0.05
HCFC2-202ENST00000544223 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
HCFC2-202ENST00000544223 UBASH3AP57075 661 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 PSMC6P62333 389 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ASIC1P78348 528 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 POTEEQ6S8J3 1075 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 SLF1Q9BQI6 1058 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 PICK1Q9NRD5 415 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 KIAA1024Q9UPX6 916 aa15.38■□□□□ 0.05
HCFC2-202ENST00000544223 ZBTB39O15060 712 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 NKRFO15226 690 aaKnown RBP eCLIP15.37■□□□□ 0.05
HCFC2-202ENST00000544223 MSH4O15457 936 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 STK4Q13043 487 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 HS1BP3Q53T59 392 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 TRMT1LQ7Z2T5 733 aaKnown RBP15.37■□□□□ 0.05
HCFC2-202ENST00000544223 SCYL3Q8IZE3 742 aa15.37■□□□□ 0.05
HCFC2-202ENST00000544223 ETNPPLQ8TBG4 499 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms