RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TBC1D5Q92609 795 aa26.94■■□□□ 1.9
CHFR-222ENST00000544093 RRP36Q96EU6 259 aaKnown RBP26.94■■□□□ 1.9
CHFR-222ENST00000544093 SEC63Q9UGP8 760 aaKnown RBP26.94■■□□□ 1.9
CHFR-222ENST00000544093 SLC34A2O95436 690 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 TLE2Q04725 743 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 STXBP2Q15833 593 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 SLC35G1Q2M3R5 365 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 BRDTQ58F21 947 aaPredicted RBP26.93■■□□□ 1.9
CHFR-222ENST00000544093 ARHGEF16Q5VV41 709 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 TAAR1Q96RJ0 339 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 MYL10Q9BUA6 226 aa26.93■■□□□ 1.9
CHFR-222ENST00000544093 A0A0U1RQG5 324 aaPredicted RBP26.92■■□□□ 1.9
CHFR-222ENST00000544093 DCDC2CA8MYV0 355 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 OPLAHO14841 1288 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 CLTBP09497 229 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 CPT1AP50416 773 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 EXOSC10Q01780 885 aaKnown RBP26.92■■□□□ 1.9
CHFR-222ENST00000544093 TTLL4Q14679 1199 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 RASEFQ8IZ41 740 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 KCNB2Q92953 911 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 VTI1AQ96AJ9 217 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 UBE2OQ9C0C9 1292 aaKnown RBP26.92■■□□□ 1.9
CHFR-222ENST00000544093 PRDM5Q9NQX1 630 aaPredicted RBP26.92■■□□□ 1.9
CHFR-222ENST00000544093 COL20A1Q9P218 1284 aa26.92■■□□□ 1.9
CHFR-222ENST00000544093 LTBP2Q14767 1821 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 GCOM1H8Y6P7 765 aaPredicted RBP26.91■■□□□ 1.9
CHFR-222ENST00000544093 POLR2MP0CAP2 368 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 HSPA4P34932 840 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 FXR1P51114 621 aaKnown RBP eCLIP26.91■■□□□ 1.9
CHFR-222ENST00000544093 BEX3Q00994 111 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 FANCBQ8NB91 859 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 PDLIM7Q9NR12 457 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 PXMP2Q9NR77 195 aa26.91■■□□□ 1.9
CHFR-222ENST00000544093 KIAA1217Q5T5P2 1943 aa26.9■■□□□ 1.9
CHFR-222ENST00000544093 PQBP1O60828 265 aaKnown RBP26.9■■□□□ 1.9
CHFR-222ENST00000544093 EIF3JO75822 258 aaKnown RBP26.9■■□□□ 1.9
CHFR-222ENST00000544093 LRRC2Q9BYS8 371 aa26.9■■□□□ 1.9
CHFR-222ENST00000544093 ARVCFO00192 962 aa26.89■■□□□ 1.9
CHFR-222ENST00000544093 TXNP10599 105 aaKnown RBP26.89■■□□□ 1.9
CHFR-222ENST00000544093 IRX5P78411 483 aaPredicted RBP26.89■■□□□ 1.9
CHFR-222ENST00000544093 COL9A3Q14050 684 aaPredicted RBP26.89■■□□□ 1.9
CHFR-222ENST00000544093 ADCK5Q3MIX3 580 aa26.89■■□□□ 1.9
CHFR-222ENST00000544093 POLR3EQ9NVU0 708 aa26.89■■□□□ 1.9
CHFR-222ENST00000544093 RBM28Q9NW13 759 aaKnown RBP26.89■■□□□ 1.9
CHFR-222ENST00000544093 NR3C2P08235 984 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 EIF2AK2P19525 551 aaKnown RBP26.88■■□□□ 1.89
CHFR-222ENST00000544093 CDK7P50613 346 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 RCAN1P53805 252 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 MDM2Q00987 491 aaPredicted RBP26.88■■□□□ 1.89
CHFR-222ENST00000544093 MICU3Q86XE3 530 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 TDHQ8IZJ6 230 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 OR6J1Q8NGC5 347 aa26.88■■□□□ 1.89
CHFR-222ENST00000544093 KIAA0355O15063 1070 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 KPNA6O60684 536 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 FGD1P98174 961 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 APOA5Q6Q788 366 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 CXCL17Q6UXB2 119 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 TMTC3Q6ZXV5 915 aa26.87■■□□□ 1.89
CHFR-222ENST00000544093 SRBD1Q8N5C6 995 aaKnown RBP26.87■■□□□ 1.89
CHFR-222ENST00000544093 TLR3O15455 904 aaKnown RBP26.86■■□□□ 1.89
CHFR-222ENST00000544093 ZBTB43O43298 467 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 PLEKHA8P1O95397 391 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 RXRAP19793 462 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 HOXA13P31271 388 aaPredicted RBP26.86■■□□□ 1.89
CHFR-222ENST00000544093 KCNV1Q6PIU1 500 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 PDCD2LQ9BRP1 358 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 TMEM39AQ9NV64 488 aa26.86■■□□□ 1.89
CHFR-222ENST00000544093 PSMA5P28066 241 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 FAAP100Q0VG06 881 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 TMEM63BQ5T3F8 832 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 CCDC62Q6P9F0 684 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 BLOC1S2Q6QNY1 142 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 SEPT14Q6ZU15 432 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 PIBF1Q8WXW3 757 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 CUL5Q93034 780 aa26.85■■□□□ 1.89
CHFR-222ENST00000544093 TRIM43BA6NCK2 446 aa26.84■■□□□ 1.89
CHFR-222ENST00000544093 A6NJR5 290 aa26.84■■□□□ 1.89
CHFR-222ENST00000544093 ITGA7Q13683 1181 aa26.84■■□□□ 1.89
CHFR-222ENST00000544093 SLC43A3Q8NBI5 491 aa26.84■■□□□ 1.89
CHFR-222ENST00000544093 TRIM43Q96BQ3 446 aaPredicted RBP26.84■■□□□ 1.89
CHFR-222ENST00000544093 JAKMIP1Q96N16 626 aaKnown RBP26.84■■□□□ 1.89
CHFR-222ENST00000544093 SNX14Q9Y5W7 946 aa26.84■■□□□ 1.89
CHFR-222ENST00000544093 PIK3CDO00329 1044 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 GH1P01241 217 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 RAG1P15918 1043 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 PGM5Q15124 567 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 RTN1Q16799 776 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 SH3RF1Q7Z6J0 888 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 VSIG10LQ86VR7 867 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 FAM126BQ8IXS8 530 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 FBXL16Q8N461 479 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 TCEANC2Q96MN5 208 aa26.83■■□□□ 1.89
CHFR-222ENST00000544093 STAM2O75886 525 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 PTGS1P23219 599 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 CCND2P30279 289 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 LRIT3Q3SXY7 679 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 FCHSD1Q86WN1 690 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 TEX2Q8IWB9 1127 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 BADQ92934 168 aa26.82■■□□□ 1.88
CHFR-222ENST00000544093 MTG1Q9BT17 334 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms