RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RSPO2Q6UXX9 243 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CREG2Q8IUH2 290 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 PCDH19Q8TAB3 1148 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 ZFYVE21Q9BQ24 234 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 METTL22Q9BUU2 404 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-207ENST00000544052 MKNK2Q9HBH9 465 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CHPF2Q9P2E5 772 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 PHLDB1Q86UU1 1377 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CYP26A1O43174 497 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 NPTXRO95502 500 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 IGLV1-40P01703 118 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CKMP06732 381 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 RPL10P27635 214 aaKnown RBP5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CLCN7P51798 805 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 DHCR24Q15392 516 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 KRTAP1-3Q8IUG1 177 aa5.09□□□□□ -1.59
SCFD1-207ENST00000544052 ZC3H7BQ9UGR2 993 aaKnown RBP5.09□□□□□ -1.59
SCFD1-207ENST00000544052 CECR2Q9BXF3 1484 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 B4E1Z4 1266 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 M0R2C6 588 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 ESR1P03372 595 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 FSTP19883 344 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 PMLP29590 882 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TMPRSS15P98073 1019 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 EGR3Q06889 387 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 PAK1Q13153 545 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 KCNAB2Q13303 367 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 MTMR1Q13613 665 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 THAP5Q7Z6K1 395 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TMEM52Q8NDY8 209 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.08□□□□□ -1.62e-17■■■■□ 19.6
SCFD1-207ENST00000544052 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 NETO1Q8TDF5 533 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 CEP89Q96ST8 783 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 MMP19Q99542 508 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TTC1Q99614 292 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TRIM8Q9BZR9 551 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-207ENST00000544052 ERVK13-1Q9NX77 482 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 C7orf72A4D263 438 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TRAF5O00463 557 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 GPR39O43194 453 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 SOD2P04179 222 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 CPEP16870 476 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 SCNN1BP51168 640 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 TEKQ02763 1124 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 RNF111Q6ZNA4 994 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 NOL8Q76FK4 1167 aaKnown RBP5.08□□□□□ -1.6
SCFD1-207ENST00000544052 WAPLQ7Z5K2 1190 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 DDX53Q86TM3 631 aaKnown RBP5.08□□□□□ -1.6
SCFD1-207ENST00000544052 NAT16Q8N8M0 369 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 COG1Q8WTW3 980 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 USP7Q93009 1102 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 ALG1Q9BT22 464 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 IPPKQ9H8X2 491 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 BTG4Q9NY30 223 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 SLC5A4Q9NY91 659 aa5.08□□□□□ -1.6
SCFD1-207ENST00000544052 PITPNM2Q9BZ72 1349 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 PYGMP11217 842 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 HOXA10P31260 410 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-207ENST00000544052 CD96P40200 585 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 BCL6P41182 706 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 CEBPAP49715 358 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-207ENST00000544052 DNM2P50570 870 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 IFI16Q16666 785 aaKnown RBP5.07□□□□□ -1.6
SCFD1-207ENST00000544052 IQCEQ6IPM2 695 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 ZDHHC13Q8IUH4 622 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 ASPSCR1Q9BZE9 553 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 CDIP1Q9H305 208 aa5.07□□□□□ -1.6
SCFD1-207ENST00000544052 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.07□□□□□ -1.65e-6■■■□□ 17
SCFD1-207ENST00000544052 CCDC66A2RUB6 948 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 PRR19A6NJB7 356 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 CBX4O00257 560 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 TBC1D8O95759 1140 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 F2P00734 622 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 APPP05067 770 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 NAT1P18440 290 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 ADCYAP1R1P41586 468 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 DSG1Q02413 1049 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 ITKQ08881 620 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 KIZQ2M2Z5 673 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 TMEM177Q53S58 311 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 CISD2Q8N5K1 135 aaKnown RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 OR2W6PQ8NHA6 318 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 DPF3Q92784 378 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 KCNJ15Q99712 375 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 SMAD5Q99717 465 aaKnown RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 JAM3Q9BX67 310 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
SCFD1-207ENST00000544052 IFT22Q9H7X7 185 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 CRTAC1Q9NQ79 661 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 BRINP1O60477 761 aa5.06□□□□□ -1.6
SCFD1-207ENST00000544052 BPIP17213 487 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms