RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 LRWD1Q9UFC0 647 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 ZC3H4Q9UPT8 1303 aaKnown RBP22.37■■□□□ 1.17
COPS7A-218ENST00000543939 IKBKBO14920 756 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CYP3A4P08684 503 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CIITAP33076 1130 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 GPR162Q16538 588 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 SARM1Q6SZW1 724 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 MLKLQ8NB16 471 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 RASSF8Q8NHQ8 419 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 LRRC15Q8TF66 581 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 WDR90Q96KV7 1748 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CUEDC2Q9H467 287 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 CCPG1Q9ULG6 757 aa22.37■■□□□ 1.17
COPS7A-218ENST00000543939 PLCG1P19174 1290 aa22.36■■□□□ 1.17
COPS7A-218ENST00000543939 PRKG1Q13976 671 aa22.36■■□□□ 1.17
COPS7A-218ENST00000543939 NCAPHQ15003 741 aa22.36■■□□□ 1.17
COPS7A-218ENST00000543939 Q4G0T1 1027 aa22.36■■□□□ 1.17
COPS7A-218ENST00000543939 SMTNL1A8MU46 457 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 MAP3K9P80192 1104 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 HS1BP3Q53T59 392 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.35■■□□□ 1.17
COPS7A-218ENST00000543939 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 FCHSD1Q86WN1 690 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 MAGEF1Q9HAY2 307 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 KBTBD4Q9NVX7 518 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 AFG3L2Q9Y4W6 797 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 SCN4AP35499 1836 aa22.35■■□□□ 1.17
COPS7A-218ENST00000543939 RBBP6Q7Z6E9 1792 aaKnown RBP22.35■■□□□ 1.17
COPS7A-218ENST00000543939 FDX1P10109 184 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 EPHX2P34913 555 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 HMGCS2P54868 508 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 CUL4BQ13620 913 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
COPS7A-218ENST00000543939 LENG9Q96B70 501 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 PLIN2Q99541 437 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 BLZF1Q9H2G9 400 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 PCDHA12Q9UN75 941 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 SNCAIPQ9Y6H5 919 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 COL11A1P12107 1806 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-218ENST00000543939 PTPRFP10586 1907 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 GLTPD2A6NH11 291 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 POTEMA6NI47 508 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 TBX3O15119 743 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 MARCH6O60337 910 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 PLA2G4DQ86XP0 818 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 SLFN12Q8IYM2 578 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 ETNPPLQ8TBG4 499 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 CALML4Q96GE6 196 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 DACH1Q9UI36 760 aa22.34■■□□□ 1.17
COPS7A-218ENST00000543939 FAM86B1E9PN63 330 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 MYL1P05976 194 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 FAM86B2P0C5J1 330 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 HSD17B4P51659 736 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 ZNF75DP51815 510 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 GHRHRQ02643 423 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 GRB10Q13322 594 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 VGLL4Q14135 290 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 PRR16Q569H4 304 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 GJA10Q969M2 543 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 TRIM5Q9C035 493 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 RAVER2Q9HCJ3 691 aaKnown RBP22.33■■□□□ 1.17
COPS7A-218ENST00000543939 PNMA2Q9UL42 364 aa22.33■■□□□ 1.17
COPS7A-218ENST00000543939 PPP1R12BO60237 982 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-218ENST00000543939 GRIN3BO60391 1043 aa22.32■■□□□ 1.16
COPS7A-218ENST00000543939 ZBED4O75132 1171 aa22.32■■□□□ 1.16
COPS7A-218ENST00000543939 MYL5Q02045 173 aa22.32■■□□□ 1.16
COPS7A-218ENST00000543939 CPXCR1Q8N123 301 aa22.32■■□□□ 1.16
COPS7A-218ENST00000543939 PNMA5Q96PV4 448 aa22.32■■□□□ 1.16
COPS7A-218ENST00000543939 VWA5AO00534 786 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 SH3D19Q5HYK7 790 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 CT47A1Q5JQC4 288 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-218ENST00000543939 KRT79Q5XKE5 535 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 ATG4CQ96DT6 458 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 NUDT12Q9BQG2 462 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 EHMT1Q9H9B1 1298 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 MCF2L2Q86YR7 1114 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 SNX29Q8TEQ0 813 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 HSD3B7Q9H2F3 369 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 TMOD4Q9NZQ9 345 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 STK17AQ9UEE5 414 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 ADAMTS5Q9UNA0 930 aa22.31■■□□□ 1.16
COPS7A-218ENST00000543939 IGLV3-22A0A075B6J6 115 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 NFIBO00712 420 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 RPN1P04843 607 aaKnown RBP22.3■■□□□ 1.16
COPS7A-218ENST00000543939 ALAS1P13196 640 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 TPM4P67936 248 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 TMEM119Q4V9L6 283 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 CDCA5Q96FF9 252 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 FAM20AQ96MK3 541 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 BLOC1S4Q9NUP1 217 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 RMND1Q9NWS8 449 aa22.3■■□□□ 1.16
COPS7A-218ENST00000543939 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-218ENST00000543939 SLC26A4O43511 780 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 ERCC5P28715 1186 aaPredicted RBP22.29■■□□□ 1.16
COPS7A-218ENST00000543939 DSG3P32926 999 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 ZNF76P36508 570 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 HYIQ5T013 277 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 CATSPERGQ6ZRH7 1159 aa22.29■■□□□ 1.16
COPS7A-218ENST00000543939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms