RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
NPIPB4-217ENST00000543449 CUL5Q93034 780 aa11.9□□□□□ -0.5
NPIPB4-217ENST00000543449 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
NPIPB4-217ENST00000543449 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
NPIPB4-217ENST00000543449 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
NPIPB4-217ENST00000543449 TNRC18O15417 2968 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 ARVCFO00192 962 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 STAM2O75886 525 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 PSMA5P28066 241 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 FGD1P98174 961 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 TLE2Q04725 743 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 TDHQ8IZJ6 230 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 OR6J1Q8NGC5 347 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 PIGSQ96S52 555 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 PRDM5Q9NQX1 630 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 ALPK3Q96L96 1907 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
NPIPB4-217ENST00000543449 CENPFP49454 3210 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 KIAA0355O15063 1070 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 ADCY6O43306 1168 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 PQBP1O60828 265 aaKnown RBP11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 NR3C2P08235 984 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 TXNP10599 105 aaKnown RBP11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 ZNF713Q8N859 430 aaPredicted RBP11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 FANCBQ8NB91 859 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 KCNB2Q92953 911 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 TAAR1Q96RJ0 339 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 PDLIM7Q9NR12 457 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 PXMP2Q9NR77 195 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 TMEM39AQ9NV64 488 aa11.88□□□□□ -0.51
NPIPB4-217ENST00000543449 MYADML2A6NDP7 307 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 CTAGE5O15320 804 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 CYTH3O43739 400 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 GH1P01241 217 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 SUPT20HL2P0C7V6 817 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 TGFB3P10600 412 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 RAG1P15918 1043 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 CCND2P30279 289 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 HSPA4P34932 840 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 CDK7P50613 346 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 EXOSC10Q01780 885 aaKnown RBP11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 LRIT3Q3SXY7 679 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 GNPTABQ3T906 1256 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 PDCD2LQ9BRP1 358 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 GLT8D2Q9H1C3 349 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
NPIPB4-217ENST00000543449 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 A6NJR5 290 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 PIK3CDO00329 1044 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 ZBTB43O43298 467 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 BEX3Q00994 111 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 PTPN11Q06124 597 aaPredicted RBP11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 ITGA7Q13683 1181 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 APOA5Q6Q788 366 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 BLOC1S2Q6QNY1 142 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 CXCL17Q6UXB2 119 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 MICU3Q86XE3 530 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 SLC43A3Q8NBI5 491 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 MCM3APO60318 1980 aa11.86□□□□□ -0.51
NPIPB4-217ENST00000543449 OPLAHO14841 1288 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 TIMP1P01033 207 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 CASTP20810 708 aaKnown RBP11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 FAAP100Q0VG06 881 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 LAMC2Q13753 1193 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 PGM5Q15124 567 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 RTN1Q16799 776 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 CCDC62Q6P9F0 684 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 SEPT14Q6ZU15 432 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 FAM126BQ8IXS8 530 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 TMEM199Q8N511 208 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
NPIPB4-217ENST00000543449 LCTP09848 1927 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms