RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 NDST4Q9H3R1 872 aa26.27■■□□□ 1.8
SHD-201ENST00000543264 CXorf56Q9H5V9 222 aa26.27■■□□□ 1.8
SHD-201ENST00000543264 SIK3Q9Y2K2 1263 aa26.27■■□□□ 1.8
SHD-201ENST00000543264 PLCH1Q4KWH8 1693 aa26.27■■□□□ 1.8
SHD-201ENST00000543264 LCA5LO95447 670 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 SPATS2Q86XZ4 545 aaKnown RBP26.26■■□□□ 1.79
SHD-201ENST00000543264 ZNF34Q8IZ26 560 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 ZNF473Q8WTR7 871 aaKnown RBP26.26■■□□□ 1.79
SHD-201ENST00000543264 SEMA6BQ9H3T3 888 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 SLC39A2Q9NP94 309 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 NR1D1P20393 614 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 MICALCLQ6ZW33 695 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 NOX5Q96PH1 765 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 SLC4A9Q96Q91 983 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 JPH2Q9BR39 696 aaPredicted RBP26.26■■□□□ 1.79
SHD-201ENST00000543264 GDF3Q9NR23 364 aa26.26■■□□□ 1.79
SHD-201ENST00000543264 ATXN2Q99700 1313 aaKnown RBP26.25■■□□□ 1.79
SHD-201ENST00000543264 WTIPA6NIX2 430 aaPredicted RBP26.25■■□□□ 1.79
SHD-201ENST00000543264 SEMA3FQ13275 785 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 TCP11L1Q9NUJ3 509 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 PCDHA6Q9UN73 950 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 PCDHA8Q9Y5H6 950 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 KIF5BP33176 963 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 PPARDQ03181 441 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 PAK2Q13177 524 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 TXNRD1Q16881 649 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 TMC4Q7Z404 712 aa26.25■■□□□ 1.79
SHD-201ENST00000543264 PPP1R37O75864 691 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 PCP11498 1178 aaKnown RBP26.24■■□□□ 1.79
SHD-201ENST00000543264 SLC1A4P43007 532 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 RNASE9P60153 205 aaKnown RBP26.24■■□□□ 1.79
SHD-201ENST00000543264 PIK3R5Q8WYR1 880 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 IQCDQ96DY2 449 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 CARD10Q9BWT7 1032 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.24■■□□□ 1.79
SHD-201ENST00000543264 TSPY2A6NKD2 308 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 PTGISQ16647 500 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 SLC4A8Q2Y0W8 1093 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 STAG2Q8N3U4 1231 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 CCT8L2Q96SF2 557 aa26.24■■□□□ 1.79
SHD-201ENST00000543264 TRADDQ15628 312 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 KIAA0895Q8NCT3 520 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 NUP98P52948 1817 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 PJA2O43164 708 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 KRT12Q99456 494 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 MTMR7Q9Y216 660 aa26.23■■□□□ 1.79
SHD-201ENST00000543264 ERVV-1B6SEH8 477 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 CYP2D6P10635 497 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 HDLBPQ00341 1268 aaKnown RBP26.22■■□□□ 1.79
SHD-201ENST00000543264 IFT88Q13099 833 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 NLRP14Q86W24 1093 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 C7orf25Q9BPX7 421 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 CUEDC2Q9H467 287 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 LRP5O75197 1615 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 FLT1P17948 1338 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 TDRD12Q587J7 1177 aaKnown RBP26.22■■□□□ 1.79
SHD-201ENST00000543264 CACNA2D4Q7Z3S7 1137 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 MAATS1Q7Z4T9 603 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 CASKIN2Q8WXE0 1202 aa26.22■■□□□ 1.79
SHD-201ENST00000543264 M0R2N6 131 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 ORC4O43929 436 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 MDH1P40925 334 aaKnown RBP26.21■■□□□ 1.79
SHD-201ENST00000543264 CCDC152Q4G0S7 254 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 CNNM4Q6P4Q7 775 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 MYCBPAPQ8TBZ2 947 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 ZNF384Q8TF68 577 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 ATP6V1G3Q96LB4 118 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 CENPHQ9H3R5 247 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 CD248Q9HCU0 757 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 SH3GLB2Q9NR46 395 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 E7EVH7 732 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 FTCDO95954 541 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 RCSD1Q6JBY9 416 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 HEATR3Q7Z4Q2 680 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 CCDC84Q86UT8 332 aaPredicted RBP26.21■■□□□ 1.79
SHD-201ENST00000543264 CCDC155Q8N6L0 562 aa26.21■■□□□ 1.79
SHD-201ENST00000543264 HPDP32754 393 aaPredicted RBP26.2■■□□□ 1.79
SHD-201ENST00000543264 ATP6V1AP38606 617 aa26.2■■□□□ 1.79
SHD-201ENST00000543264 EVA1CP58658 441 aa26.2■■□□□ 1.79
SHD-201ENST00000543264 BAP1Q92560 729 aa26.2■■□□□ 1.79
SHD-201ENST00000543264 PALMO75781 387 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 PPP1R2P41236 205 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 MAN2A1Q16706 1144 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 CEP85LQ5SZL2 805 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 CENPPQ6IPU0 288 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 MAGEF1Q9HAY2 307 aa26.2■■□□□ 1.78
SHD-201ENST00000543264 PPANQ9NQ55 473 aaKnown RBP26.2■■□□□ 1.78
SHD-201ENST00000543264 ANKRD36CQ5JPF3 1778 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 ASTE1Q2TB18 679 aaPredicted RBP26.19■■□□□ 1.78
SHD-201ENST00000543264 YTHDF3Q7Z739 585 aaKnown RBP26.19■■□□□ 1.78
SHD-201ENST00000543264 RNF10Q8N5U6 811 aaKnown RBP26.19■■□□□ 1.78
SHD-201ENST00000543264 NLRC4Q9NPP4 1024 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 TSKSQ9UJT2 592 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 AMPD3Q01432 767 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 DDR1Q08345 913 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 CD302Q8IX05 232 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 RNF14Q9UBS8 474 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 PACSIN2Q9UNF0 486 aaPredicted RBP26.19■■□□□ 1.78
SHD-201ENST00000543264 PLAAQ9Y263 795 aa26.19■■□□□ 1.78
SHD-201ENST00000543264 TOGARAM1Q9Y4F4 1720 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms