RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 CPT1AP50416 773 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 NKX3-2P78367 333 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 GSTO1P78417 241 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 RBM10P98175 930 aaKnown RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 MECOMQ03112 1051 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 CSTF1Q05048 431 aaKnown RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 TRIM26Q12899 539 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 FKBP5Q13451 457 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 GPNMBQ14956 572 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 CCDC27Q2M243 656 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 CERKLQ49MI3 558 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 TMEM63BQ5T3F8 832 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 CES5AQ6NT32 575 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 NFRKBQ6P4R8 1299 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 EEPD1Q7L9B9 569 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 ZNF467Q7Z7K2 595 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 ZNF605Q86T29 641 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 CCDC144CPQ8IYA2 1237 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 SPICE1Q8N0Z3 855 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 PLCD3Q8N3E9 789 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 MAGEB6Q8N7X4 407 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 DBF4BQ8NFT6 615 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 TGFBRAP1Q8WUH2 860 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 DNAAF4Q8WXU2 420 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 LPIN2Q92539 896 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 IL17RAQ96F46 866 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 ZFP91Q96JP5 570 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 LSM14BQ9BX40 385 aaKnown RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 GPR108Q9NPR9 543 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 SPATA6Q9NWH7 488 aaPredicted RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 RAI14Q9P0K7 980 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 SRPK3Q9UPE1 567 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 GNEQ9Y223 722 aaKnown RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 FRYLO94915 3013 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 FRYQ5TBA9 3013 aa4.03□□□□□ -1.76
CHD4-209ENST00000542717 HELZ2Q9BYK8 2649 aaKnown RBP4.03□□□□□ -1.76
CHD4-209ENST00000542717 NLRC5Q86WI3 1866 aa4.03□□□□□ -1.77
CHD4-209ENST00000542717 ZNF462Q96JM2 2506 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 FSD2A1L4K1 749 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 GRM8O00222 908 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 TBC1D4O60343 1298 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 GDF9O60383 454 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PPFIA3O75145 1194 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 BAG3O95817 575 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 CXCL10P02778 98 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PRB1P04280 392 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 CFHP08603 1231 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 CKBP12277 381 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PLA2G2AP14555 144 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 TGM1P22735 817 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PURAQ00577 322 aaKnown RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 PTPN11Q06124 597 aaPredicted RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 TDGQ13569 410 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 BTG3Q14201 252 aaPredicted RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 COL28A1Q2UY09 1125 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 IQSEC1Q6DN90 963 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 SNRNP48Q6IEG0 339 aaKnown RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 LLGL2Q6P1M3 1020 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 RUFY4Q6ZNE9 571 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PRR23CQ6ZRP0 262 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 KIAA1211Q6ZU35 1233 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 G2E3Q7L622 706 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 SH3RF3Q8TEJ3 882 aaPredicted RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 POF1BQ8WVV4 589 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 TOP1MTQ969P6 601 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 RUNDC1Q96C34 613 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 NECTIN4Q96NY8 510 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 BBC3Q96PG8 261 aaPredicted RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 TBC1D17Q9HA65 648 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 SEMA4GQ9NTN9 838 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 AATFQ9NY61 560 aaKnown RBP eCLIP4.02□□□□□ -1.77
CHD4-209ENST00000542717 DBR1Q9UK59 544 aaKnown RBP4.02□□□□□ -1.77
CHD4-209ENST00000542717 CA14Q9ULX7 337 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PLAGL2Q9UPG8 496 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 SIT1Q9Y3P8 196 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 PCDHGA2Q9Y5H1 932 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 IGF2RP11717 2491 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 MICAL3Q7RTP6 2002 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 FANCMQ8IYD8 2048 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 MCM3APO60318 1980 aa4.02□□□□□ -1.77
CHD4-209ENST00000542717 ADAMTS20P59510 1910 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 FLT1P17948 1338 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 RAD50Q92878 1312 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 DNAJC25-GNG10A0A024R161 153 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 POTEMA6NI47 508 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 ASB14A6NK59 587 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 RBAK-RBAKDNI3L0D1 243 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 KCNK5O95279 499 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 NTRK1P04629 796 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 MMP3P08254 477 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 PLCG2P16885 1265 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 FGFR2P21802 821 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 PHKA1P46020 1223 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 CAMK1Q14012 370 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 SEPT2Q15019 361 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 ATP2B3Q16720 1220 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 ZNF528Q3MIS6 628 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 TPRNQ4KMQ1 711 aa4.01□□□□□ -1.77
CHD4-209ENST00000542717 PSAPL1Q6NUJ1 521 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms