RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 VPS37DQ86XT2 251 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 USP33Q8TEY7 942 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 BCAS3Q9H6U6 928 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 CLEC1BQ9P126 229 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 WASHC2AQ641Q2 1341 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 TRBV23OR9-2A0A075B6M9 112 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 SASH1O94885 1247 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 NAT2P11245 290 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 ATF2P15336 505 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 SCRN1Q12765 414 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 TAF7LQ5H9L4 462 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 CRACR2BQ8N4Y2 399 aaPredicted RBP7.72□□□□□ -1.17
XRCC4-206ENST00000542685 MAP3K1Q13233 1512 aa7.72□□□□□ -1.17
XRCC4-206ENST00000542685 C7orf72A4D263 438 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 PLS3P13797 630 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 FBLN1P23142 703 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 LARP1BQ659C4 914 aaKnown RBP7.71□□□□□ -1.18
XRCC4-206ENST00000542685 C6orf15Q6UXA7 325 aaPredicted RBP7.71□□□□□ -1.18
XRCC4-206ENST00000542685 ALG3Q92685 438 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 ACTR10Q9NZ32 417 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 FAN1Q9Y2M0 1017 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 RUSC2Q8N2Y8 1516 aa7.71□□□□□ -1.18
XRCC4-206ENST00000542685 A0A0G2JLL6 359 aaPredicted RBP7.7□□□□□ -1.18
XRCC4-206ENST00000542685 NPHS1O60500 1241 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 MC3RP41968 323 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 ZNF143P52747 638 aaPredicted RBP7.7□□□□□ -1.18
XRCC4-206ENST00000542685 FOXO4P98177 505 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 GTF2IRD2BQ6EKJ0 949 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 GTF2IRD2Q86UP8 949 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 TRIM59Q8IWR1 403 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 NLGN1Q8N2Q7 840 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 SYT8Q8NBV8 401 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 FEZF2Q8TBJ5 459 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 COPS5Q92905 334 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 MTA3Q9BTC8 594 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 CCDC9Q9Y3X0 531 aaKnown RBP7.7□□□□□ -1.18
XRCC4-206ENST00000542685 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
XRCC4-206ENST00000542685 OTOL1A6NHN0 477 aaPredicted RBP7.69□□□□□ -1.18
XRCC4-206ENST00000542685 B2RBV5 119 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 B8ZZF3 427 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 RRP9O43818 475 aaKnown RBP7.69□□□□□ -1.18
XRCC4-206ENST00000542685 FUCA1P04066 466 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 THBDP07204 575 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 ASGR2P07307 311 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 NCAM1P13591 858 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 TCF3P15923 654 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 MBLAC2Q68D91 279 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 RELTQ969Z4 430 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 ZNF428Q96B54 188 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 PEX11GQ96HA9 241 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 XYLT2Q9H1B5 865 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 BTG4Q9NY30 223 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 NUDT5Q9UKK9 219 aa7.69□□□□□ -1.18
XRCC4-206ENST00000542685 DHX57Q6P158 1386 aaKnown RBP7.69□□□□□ -1.18
XRCC4-206ENST00000542685 PRRG2O14669 202 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 PMLP29590 882 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 ETFBP38117 255 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 GNL2Q13823 731 aaKnown RBP7.68□□□□□ -1.18
XRCC4-206ENST00000542685 SV2CQ496J9 727 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 WWC2Q6AWC2 1192 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 FAM43AQ8N2R8 423 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 NETO2Q8NC67 525 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 MRGPRX3Q96LB0 322 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.18
XRCC4-206ENST00000542685 RNF38Q9H0F5 515 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 CYP26B1Q9NR63 512 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.68□□□□□ -1.18
XRCC4-206ENST00000542685 MARCH2Q9P0N8 246 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 LRP2BPQ9P2M1 347 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 PMF1-BGLAPU3KQ54 211 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 PRXQ9BXM0 1461 aa7.68□□□□□ -1.18
XRCC4-206ENST00000542685 PRDM2Q13029 1718 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 FFAR3O14843 346 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 TBX1O43435 398 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 DDAH1O94760 285 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
XRCC4-206ENST00000542685 NTRK1P04629 796 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 SP8Q8IXZ3 490 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 TP53I13Q8NBR0 393 aaPredicted RBP7.67□□□□□ -1.18
XRCC4-206ENST00000542685 BTN2A2Q8WVV5 523 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 TSPAN17Q96FV3 270 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 MMP19Q99542 508 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 KRTAP4-9Q9BYQ8 210 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 NKX2-4Q9H2Z4 354 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 SIT1Q9Y3P8 196 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 BICRAQ9NZM4 1560 aa7.67□□□□□ -1.18
XRCC4-206ENST00000542685 INF2Q27J81 1249 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 ADGRG2Q8IZP9 1017 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 FNIP1Q8TF40 1166 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 FRS2Q8WU20 508 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 DPF3Q92784 378 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 PRKAG3Q9UGI9 489 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 NCANO14594 1321 aa7.66□□□□□ -1.18
XRCC4-206ENST00000542685 ITGAVP06756 1048 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 NFIXQ14938 502 aa7.65□□□□□ -1.18
XRCC4-206ENST00000542685 SLC9A5Q14940 896 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms