RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 DEFB128Q7Z7B8 93 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 TBC1D10CQ8IV04 446 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 SCFD2Q8WU76 684 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 MTCH2Q9Y6C9 303 aa14.3□□□□□ -0.12
COPS7A-213ENST00000542150 RFXAPO00287 272 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 CA3P07451 260 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
COPS7A-213ENST00000542150 PDE4DQ08499 809 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 HDAC1Q13547 482 aaPredicted RBP14.29□□□□□ -0.12
COPS7A-213ENST00000542150 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 MAF1Q9H063 256 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
COPS7A-213ENST00000542150 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 TRANK1O15050 2925 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 SCN10AQ9Y5Y9 1956 aa14.29□□□□□ -0.12
COPS7A-213ENST00000542150 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
COPS7A-213ENST00000542150 HAND2P61296 217 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 TAP1Q03518 808 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
COPS7A-213ENST00000542150 FAM47CQ5HY64 1035 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 SESTD1Q86VW0 696 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 ANKS1AQ92625 1134 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 KAT2BQ92831 832 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
COPS7A-213ENST00000542150 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.12
COPS7A-213ENST00000542150 RAD50Q92878 1312 aa14.27□□□□□ -0.12
COPS7A-213ENST00000542150 TFF2Q03403 129 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 RBL2Q08999 1139 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-213ENST00000542150 GPATCH4Q5T3I0 446 aaKnown RBP14.27□□□□□ -0.13
COPS7A-213ENST00000542150 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-213ENST00000542150 NECAB3Q96P71 396 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-213ENST00000542150 CPVLQ9H3G5 476 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 COL20A1Q9P218 1284 aa14.27□□□□□ -0.13
COPS7A-213ENST00000542150 GOLGA8HP0CJ92 632 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 ACTN1P12814 892 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 ARHGAP1Q07960 439 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 DHX38Q92620 1227 aaKnown RBP14.26□□□□□ -0.13
COPS7A-213ENST00000542150 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
COPS7A-213ENST00000542150 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 TSPYL2Q9H2G4 693 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-213ENST00000542150 CERS4Q9HA82 394 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 RAPGEFL1Q9UHV5 662 aa14.26□□□□□ -0.13
COPS7A-213ENST00000542150 PRRC2BQ5JSZ5 2229 aaKnown RBP14.25□□□□□ -0.13
COPS7A-213ENST00000542150 NEDD4P46934 1319 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 LPXNO60711 386 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 BAIAP3O94812 1187 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 CXCL10P02778 98 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 MMP3P08254 477 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 NT5C2P49902 561 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 KCNQ1P51787 676 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
COPS7A-213ENST00000542150 BFSP2Q13515 415 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 USH1GQ495M9 461 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 KRT40Q6A162 431 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
COPS7A-213ENST00000542150 SPRED2Q7Z698 418 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 AFAP1L1Q8TED9 768 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 RNF41Q9H4P4 317 aaPredicted RBP14.25□□□□□ -0.13
COPS7A-213ENST00000542150 GBF1Q92538 1859 aa14.25□□□□□ -0.13
COPS7A-213ENST00000542150 B4DLN1 442 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 GH1P01241 217 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 SDSP20132 328 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 MRPL12P52815 198 aaKnown RBP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 PTGISQ16647 500 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 TCTN1Q2MV58 587 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 NSUN6Q8TEA1 469 aaKnown RBP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 ESR2Q92731 530 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 IWS1Q96ST2 819 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 CRBNQ96SW2 442 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
COPS7A-213ENST00000542150 FTOQ9C0B1 505 aaKnown RBP eCLIP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
COPS7A-213ENST00000542150 ABCB11O95342 1321 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 HAS3O00219 553 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 OPLAHO14841 1288 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 TLL1O43897 1013 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 NBNO60934 754 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 WDR5P61964 334 aaKnown RBP14.23□□□□□ -0.13
COPS7A-213ENST00000542150 GHRHRQ02643 423 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 GRB10Q13322 594 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 AAK1Q2M2I8 961 aa14.23□□□□□ -0.13
COPS7A-213ENST00000542150 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
COPS7A-213ENST00000542150 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms