RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 VPS72Q15906 364 aa11.2□□□□□ -0.62
CX3CR1-206ENST00000542107 RRAGAQ7L523 313 aa11.2□□□□□ -0.62
CX3CR1-206ENST00000542107 NLRC4Q9NPP4 1024 aa11.2□□□□□ -0.62
CX3CR1-206ENST00000542107 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 ZBTB22O15209 634 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 AKR1B10O60218 316 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 ATP2B4P23634 1241 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 CXCR5P32302 372 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 ZBED6P86452 979 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 AMPD2Q01433 879 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 CASP8Q14790 479 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MIIPQ5JXC2 388 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 KRT79Q5XKE5 535 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 NELFCDQ8IXH7 590 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MYO1AQ9UBC5 1043 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 FAN1Q9Y2M0 1017 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 G3V3G9 751 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MYL1P05976 194 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 PLCG2P16885 1265 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MSANTD4Q8NCY6 345 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 DDX12PQ92771 950 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 CRACR2AQ9BSW2 395 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 NDST4Q9H3R1 872 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 CUEDC2Q9H467 287 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 L1RE1Q9UN81 338 aa11.19□□□□□ -0.62
CX3CR1-206ENST00000542107 CACNB3P54284 484 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 ARID5AQ03989 594 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 HSP90B2PQ58FF3 399 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 PLEKHA4Q9H4M7 779 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 POLD4Q9HCU8 107 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 SCN7AQ01118 1682 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 MOCS3O95396 460 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 SNAP25P60880 206 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 C2orf54Q08AI8 447 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TCP10Q12799 353 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 VWA3BQ502W6 1294 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 RAB21Q9UL25 225 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TRAF5O00463 557 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 MAP2K7O14733 419 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 ZNF263O14978 683 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 EIF4A3P38919 411 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 ECM1Q16610 540 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 ADGRF4Q8IZF3 695 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 SECISBP2LQ93073 1101 aaKnown RBP11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 UBXN6Q9BZV1 441 aa11.18□□□□□ -0.62
CX3CR1-206ENST00000542107 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 ROBO3Q96MS0 1386 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 PDE2AO00408 941 aaPredicted RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 PSMD14O00487 310 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 TOM1O60784 492 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 EIF3JO75822 258 aaKnown RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 APBA1Q02410 837 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 CCDC40Q4G0X9 1142 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 TTYH3Q9C0H2 523 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 E9PMD0 336 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 BUB1O43683 1085 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 UNC13DQ70J99 1090 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 RIN2Q8WYP3 895 aaPredicted RBP11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 MTMR9Q96QG7 549 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 RAB34Q9BZG1 259 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 RIOX1Q9H6W3 641 aa11.17□□□□□ -0.62
CX3CR1-206ENST00000542107 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms