RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.45□□□□□ -1.22
CIT-211ENST00000541841 NCANO14594 1321 aa7.45□□□□□ -1.22
CIT-211ENST00000541841 NPHP3-ACAD11A0A0J9YXS1 232 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 C7orf72A4D263 438 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 PRRG2O14669 202 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 FFAR3O14843 346 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 SMAD7O15105 426 aaKnown RBP7.44□□□□□ -1.22
CIT-211ENST00000541841 TBX1O43435 398 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 ASGR2P07307 311 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 PLS3P13797 630 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 PFKLP17858 780 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 GRB10Q13322 594 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 C6orf15Q6UXA7 325 aaPredicted RBP7.44□□□□□ -1.22
CIT-211ENST00000541841 BVESQ8NE79 360 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 ALG3Q92685 438 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 MTA3Q9BTC8 594 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 ADAM7Q9H2U9 754 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 EMC9Q9Y3B6 208 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 SBNO2Q9Y2G9 1366 aa7.44□□□□□ -1.22
CIT-211ENST00000541841 PAMP19021 973 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 PMLP29590 882 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 FOXO4P98177 505 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 ARID5AQ03989 594 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 LARP1BQ659C4 914 aaKnown RBP7.43□□□□□ -1.22
CIT-211ENST00000541841 SDE2Q6IQ49 451 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 RELTQ969Z4 430 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 ARMC5Q96C12 935 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 APBA2Q99767 749 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 POLR3GLQ9BT43 218 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 ZSWIM4Q9H7M6 989 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 TBX22Q9Y458 520 aa7.43□□□□□ -1.22
CIT-211ENST00000541841 SASH1O94885 1247 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 FUCA1P04066 466 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 THBDP07204 575 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 GTF2IRD2BQ6EKJ0 949 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 GTF2IRD2Q86UP8 949 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 NLGN1Q8N2Q7 840 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 USP33Q8TEY7 942 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 BTN2A2Q8WVV5 523 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 STRIP2Q9ULQ0 834 aa7.42□□□□□ -1.22
CIT-211ENST00000541841 NTRK1P04629 796 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 RBL2Q08999 1139 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 TARBP2Q15633 366 aaKnown RBP7.41□□□□□ -1.22
CIT-211ENST00000541841 INF2Q27J81 1249 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 VWA3BQ502W6 1294 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 FNIP1Q8TF40 1166 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 DPF3Q92784 378 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 COPS5Q92905 334 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 MARCH2Q9P0N8 246 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 FAN1Q9Y2M0 1017 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 PMF1-BGLAPU3KQ54 211 aa7.41□□□□□ -1.22
CIT-211ENST00000541841 NOP56O00567 594 aaKnown RBP7.4□□□□□ -1.22
CIT-211ENST00000541841 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.22
CIT-211ENST00000541841 SSBP05455 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
CIT-211ENST00000541841 ETFBP38117 255 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 NFIXQ14938 502 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 EGFLAMQ63HQ2 1017 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 CABP7Q86V35 215 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 MCF2L2Q86YR7 1114 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 TEX2Q8IWB9 1127 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 ZNF526Q8TF50 670 aaPredicted RBP7.4□□□□□ -1.22
CIT-211ENST00000541841 GPATCH3Q96I76 525 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 MRGPRX3Q96LB0 322 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 SYT3Q9BQG1 590 aa7.4□□□□□ -1.22
CIT-211ENST00000541841 NPHS1O60500 1241 aa7.39□□□□□ -1.23
CIT-211ENST00000541841 NCAM1P13591 858 aa7.39□□□□□ -1.23
CIT-211ENST00000541841 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
CIT-211ENST00000541841 FAM178BQ8IXR5 827 aa7.39□□□□□ -1.23
CIT-211ENST00000541841 NOX5Q96PH1 765 aa7.39□□□□□ -1.23
CIT-211ENST00000541841 ACTR10Q9NZ32 417 aa7.39□□□□□ -1.23
CIT-211ENST00000541841 TMEFF2Q9UIK5 374 aaPredicted RBP7.39□□□□□ -1.23
CIT-211ENST00000541841 ARNTLO00327 626 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 SLURP1P55000 103 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 NCAPHQ15003 741 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 SF1Q15637 639 aaKnown RBP7.38□□□□□ -1.23
CIT-211ENST00000541841 PRSS53Q2L4Q9 553 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 SV2CQ496J9 727 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
CIT-211ENST00000541841 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 NETO2Q8NC67 525 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 SMARCC2Q8TAQ2 1214 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 PLEKHO2Q8TD55 490 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 FRS2Q8WU20 508 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 TSPAN17Q96FV3 270 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 SPATA25Q9BR10 227 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 OSBPL2Q9H1P3 480 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 RTEL1Q9NZ71 1219 aa7.38□□□□□ -1.23
CIT-211ENST00000541841 ITGAVP06756 1048 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 FGRP09769 529 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 FPR2P25090 351 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 ECI1P42126 302 aa7.37□□□□□ -1.23
CIT-211ENST00000541841 DLX2Q07687 328 aaPredicted RBP7.37□□□□□ -1.23
CIT-211ENST00000541841 POMZP3Q6PJE2 187 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms