RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PTPROQ16827 1216 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 SLFN13Q68D06 897 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 CEP19Q96LK0 163 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 GDAP1L1Q96MZ0 367 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ELF1P32519 619 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ARHGDIAP52565 204 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 APBA1Q02410 837 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 MMTAG2Q9BU76 263 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 CAPS2Q9BXY5 557 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 TPX2Q9ULW0 747 aaKnown RBP11.67□□□□□ -0.54
GABRB3-204ENST00000541819 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
GABRB3-204ENST00000541819 MYO1FO00160 1098 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 STK25O00506 426 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SGSM2O43147 1006 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 CHEK2O96017 543 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SCNN1DP51172 638 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 USP17L21D6R901 530 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 M0R2C6 588 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 NPR1P16066 1061 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 CCND2P30279 289 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 ESRRGP62508 458 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 EXOC3L4Q17RC7 722 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 GIPC2Q8TF65 315 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 NUP160Q12769 1436 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SUN1O94901 812 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 RPN1P04843 607 aaKnown RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SLC7A3Q8WY07 619 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SUDS3Q9H7L9 328 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 FIS1Q9Y3D6 152 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 PFKFB1P16118 471 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 Q3C1V9 767 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 ARMC9Q7Z3E5 817 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SIX6OS1Q8N1H7 587 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 ACCSQ96QU6 501 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 XPO4Q9C0E2 1151 aaKnown RBP11.66□□□□□ -0.54
GABRB3-204ENST00000541819 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 SBNO1A3KN83 1393 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
GABRB3-204ENST00000541819 KLRF2D3W0D1 207 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 KRT1P04264 644 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 SCG2P13521 617 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 GCKP35557 465 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 MSH2P43246 934 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 RNF139Q8WU17 664 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 TRIM15Q9C019 465 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 DUOX2Q9NRD8 1548 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 PPP1R12AO14974 1030 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-204ENST00000541819 GAP43P17677 238 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 MAPK4P31152 587 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ATP1A2P50993 1020 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 MYO1EQ12965 1108 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 LRRC4Q9HBW1 653 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 MID2Q9UJV3 735 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ZNF215Q9UL58 517 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-204ENST00000541819 SNX1Q13596 522 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 MESDQ14696 234 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 SPOPLQ6IQ16 392 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 G2E3Q7L622 706 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 KSR1Q8IVT5 923 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 SLC39A2Q9NP94 309 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 YWHAHQ04917 246 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ACBD5Q5T8D3 534 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ADALQ6DHV7 355 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 ZNF577Q9BSK1 485 aa11.65□□□□□ -0.54
GABRB3-204ENST00000541819 INO80BQ9C086 356 aaPredicted RBP11.65□□□□□ -0.54
GABRB3-204ENST00000541819 SYF2O95926 243 aaKnown RBP11.65□□□□□ -0.55
GABRB3-204ENST00000541819 MAP2K2P36507 400 aa11.65□□□□□ -0.55
GABRB3-204ENST00000541819 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.55
GABRB3-204ENST00000541819 ZBTB41Q5SVQ8 909 aa11.65□□□□□ -0.55
GABRB3-204ENST00000541819 KLC3Q6P597 504 aa11.65□□□□□ -0.55
GABRB3-204ENST00000541819 DARS2Q6PI48 645 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms