RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 NKD2Q969F2 451 aaPredicted RBP11.71□□□□□ -0.53
CHFR-220ENST00000541817 CCDC17Q96LX7 622 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHFR-220ENST00000541817 WDR11Q9BZH6 1224 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 ACAD9Q9H845 621 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 RNF146Q9NTX7 359 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.53
CHFR-220ENST00000541817 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 DMXL1Q9Y485 3027 aa11.71□□□□□ -0.54
CHFR-220ENST00000541817 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 USP17L21D6R901 530 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 GRM6O15303 877 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 LGR5O75473 907 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 CXCL10P02778 98 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 ALAS1P13196 640 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 CPT1AP50416 773 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
CHFR-220ENST00000541817 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
CHFR-220ENST00000541817 MUM1L1Q5H9M0 696 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
CHFR-220ENST00000541817 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 ISY1Q9ULR0 285 aaKnown RBP11.7□□□□□ -0.54
CHFR-220ENST00000541817 MICAL3Q7RTP6 2002 aa11.7□□□□□ -0.54
CHFR-220ENST00000541817 KMT2BQ9UMN6 2715 aaPredicted RBP11.69□□□□□ -0.54
CHFR-220ENST00000541817 FAM186AA6NE01 2351 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 CKBP12277 381 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
CHFR-220ENST00000541817 FBXO11Q86XK2 927 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 TMEM105Q8N8V8 129 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
CHFR-220ENST00000541817 WNT8BQ93098 351 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
CHFR-220ENST00000541817 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 CACNA1HO95180 2353 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 PDE6AP16499 860 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 NDUFV1P49821 464 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
CHFR-220ENST00000541817 MBTPS1Q14703 1052 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 NSMFQ6X4W1 530 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 CAGE1Q8TC20 777 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 YME1L1Q96TA2 773 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 VTA1Q9NP79 307 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
CHFR-220ENST00000541817 RIF1Q5UIP0 2472 aaKnown RBP11.68□□□□□ -0.54
CHFR-220ENST00000541817 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
CHFR-220ENST00000541817 AMHP03971 560 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 GNAI3P08754 354 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 ARP10275 920 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 SP100P23497 879 aaPredicted RBP11.67□□□□□ -0.54
CHFR-220ENST00000541817 CTNNB1P35222 781 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 PTPN11Q06124 597 aaPredicted RBP11.67□□□□□ -0.54
CHFR-220ENST00000541817 ADAM15Q13444 863 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 KIAA2013Q8IYS2 634 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 DBF4BQ8NFT6 615 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
CHFR-220ENST00000541817 MSLNLQ96KJ4 702 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 RIPOR3Q96MK2 946 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
CHFR-220ENST00000541817 NCK2O43639 380 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 IGSF3O75054 1194 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 BCAR3O75815 825 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 CHGBP05060 677 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
CHFR-220ENST00000541817 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
CHFR-220ENST00000541817 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 ADGRD2Q7Z7M1 963 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
CHFR-220ENST00000541817 OSBPL7Q9BZF2 842 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 CLEC1BQ9P126 229 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 FEM1BQ9UK73 627 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 TNNQ9UQP3 1299 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 USP15Q9Y4E8 981 aaPredicted RBP11.66□□□□□ -0.54
CHFR-220ENST00000541817 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
CHFR-220ENST00000541817 TCRBV5S4A2TA0A5A2 114 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 EFCAB14O75071 495 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 SURF6O75683 361 aaKnown RBP11.65□□□□□ -0.54
CHFR-220ENST00000541817 MBD4O95243 580 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 OAZ1P54368 228 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 COL9A2Q14055 689 aaPredicted RBP11.65□□□□□ -0.54
CHFR-220ENST00000541817 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 SMOC2Q9H3U7 446 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 HDAC6Q9UBN7 1215 aa11.65□□□□□ -0.54
CHFR-220ENST00000541817 BARX2Q9UMQ3 279 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms