RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 TTYH1Q9H313 450 aaPredicted RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 RBM47A0AV96 593 aaKnown RBP16.35■□□□□ 0.21
SUDS3-203ENST00000541591 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 TXNP10599 105 aaKnown RBP16.35■□□□□ 0.21
SUDS3-203ENST00000541591 CYP2C9P11712 490 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 EDNRBP24530 442 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 ANTXR2P58335 489 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 TRDNQ13061 729 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 SCLYQ96I15 445 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 MYL10Q9BUA6 226 aa16.35■□□□□ 0.21
SUDS3-203ENST00000541591 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
SUDS3-203ENST00000541591 OPLAHO14841 1288 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 ZEB2O60315 1214 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 HOXA13P31271 388 aaPredicted RBP16.34■□□□□ 0.21
SUDS3-203ENST00000541591 PURAQ00577 322 aaKnown RBP16.34■□□□□ 0.21
SUDS3-203ENST00000541591 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
SUDS3-203ENST00000541591 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 PIGSQ96S52 555 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 WNT8AQ9H1J5 351 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 HIPK3Q9H422 1215 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 STXBP5LQ9Y2K9 1186 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
SUDS3-203ENST00000541591 UNC80Q8N2C7 3258 aa16.34■□□□□ 0.21
SUDS3-203ENST00000541591 PBX2P40425 430 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 GRM4Q14833 912 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 WTAPQ15007 396 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 ZNF365Q70YC5 407 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 DNERQ8NFT8 737 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 SCFD2Q8WU76 684 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
SUDS3-203ENST00000541591 NOC4LQ9BVI4 516 aaKnown RBP16.33■□□□□ 0.2
SUDS3-203ENST00000541591 SEMA6BQ9H3T3 888 aa16.33■□□□□ 0.2
SUDS3-203ENST00000541591 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 CABYRO75952 493 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 CPT1AP50416 773 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 SMAD3P84022 425 aaKnown RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 PPIGQ13427 754 aaKnown RBP eCLIP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 MB21D2Q8IYB1 491 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 TMEM199Q8N511 208 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 NCOA7Q8NI08 942 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 MPHOSPH6Q99547 160 aaKnown RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 CXXC1Q9P0U4 656 aaPredicted RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 PNMA2Q9UL42 364 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 MRPL11Q9Y3B7 192 aaKnown RBP16.32■□□□□ 0.2
SUDS3-203ENST00000541591 Q9Y3F1 56 aa16.32■□□□□ 0.2
SUDS3-203ENST00000541591 SIP14410 1827 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
SUDS3-203ENST00000541591 CYTH3O43739 400 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 RXRAP19793 462 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 OTOP2Q7RTS6 562 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 PCDHA1Q9Y5I3 950 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 PRUNE2Q8WUY3 3088 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
SUDS3-203ENST00000541591 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 ERICH2A1L162 156 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 ZBTB5O15062 677 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 MMP3P08254 477 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 DNAJB2P25686 324 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 ARHGAP1Q07960 439 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
SUDS3-203ENST00000541591 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
SUDS3-203ENST00000541591 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.2
SUDS3-203ENST00000541591 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
SUDS3-203ENST00000541591 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
SUDS3-203ENST00000541591 LOC102724159A0A0B4J2E5 919 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 ZNF286BP0CG31 522 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 NT5C2P49902 561 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 PWP2Q15269 919 aaKnown RBP16.29■□□□□ 0.2
SUDS3-203ENST00000541591 STXBP2Q15833 593 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 CCDC62Q6P9F0 684 aa16.29■□□□□ 0.2
SUDS3-203ENST00000541591 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms