RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RAVER2Q9HCJ3 691 aaKnown RBP9.82□□□□□ -0.84
THBS3-210ENST00000541576 TRAF5O00463 557 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 IRF6O14896 467 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 POLR2DO15514 142 aaKnown RBP9.82□□□□□ -0.84
THBS3-210ENST00000541576 GCFC2P16383 781 aaKnown RBP9.82□□□□□ -0.84
THBS3-210ENST00000541576 DSG3P32926 999 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 USP11P51784 963 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 PDILTQ8N807 584 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 CCDC94Q9BW85 323 aaPredicted RBP9.82□□□□□ -0.84
THBS3-210ENST00000541576 ZNF408Q9H9D4 720 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 PTPRFP10586 1907 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 SLC37A4O43826 429 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 CALCRLQ16602 461 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 FCHSD1Q86WN1 690 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 TBC1D5Q92609 795 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 DDX25Q9UHL0 483 aaKnown RBP9.82□□□□□ -0.84
THBS3-210ENST00000541576 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
THBS3-210ENST00000541576 FOXN1O15353 648 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 ALAS1P13196 640 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 CDC25AP30304 524 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 SREBF1P36956 1147 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 ARHGAP4P98171 946 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 KRBA2Q6ZNG9 492 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 CNNM3Q8NE01 707 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 WNK4Q96J92 1243 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 HOXC10Q9NYD6 342 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 RLFQ13129 1914 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 CXCL11O14625 94 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 PPIL2Q13356 520 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 MCF2L2Q86YR7 1114 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 CRYGNQ8WXF5 182 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 MTMR9Q96QG7 549 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 SERTAD1Q9UHV2 236 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 ADAMTS5Q9UNA0 930 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 MYPNQ86TC9 1320 aa9.81□□□□□ -0.84
THBS3-210ENST00000541576 A0A0G2JLL6 359 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 TXLNAP40222 546 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 FMR1Q06787 632 aaKnown RBP eCLIP9.8□□□□□ -0.84
THBS3-210ENST00000541576 TREML2Q5T2D2 321 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 LDLRAD1Q5T700 205 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 MOXD1Q6UVY6 613 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 GADL1Q6ZQY3 521 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 PRRT2Q7Z6L0 340 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 OPTNQ96CV9 577 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 CYP3A7-CYP3A51PA0A087WV96 503 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 NFIBO00712 420 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 ZNF500O60304 480 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 ZSCAN20P17040 1043 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 CYP3A7P24462 503 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 OAZ1P54368 228 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 ANO6Q4KMQ2 910 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 REPS2Q8NFH8 660 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 CLEC4DQ8WXI8 215 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 EHMT1Q9H9B1 1298 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 NMRK2Q9NPI5 230 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 KCNH4Q9UQ05 1017 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 PP2D1A8MPX8 630 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 ACTN4O43707 911 aaKnown RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 CDK11BP21127 795 aaKnown RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 TXKP42681 527 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 PNOCQ13519 176 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 DHX58Q96C10 678 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 AK8Q96MA6 479 aa9.8□□□□□ -0.84
THBS3-210ENST00000541576 HOOK1Q9UJC3 728 aaKnown RBP9.8□□□□□ -0.84
THBS3-210ENST00000541576 UNCXA6NJT0 531 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 MARCH6O60337 910 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 UBA7P41226 1012 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 TECP42680 631 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 HSD17B4P51659 736 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 TMEM266Q2M3C6 531 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 SNRNP48Q6IEG0 339 aaKnown RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 GRAMD1CQ8IYS0 662 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 ZNF526Q8TF50 670 aaPredicted RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 CCDC34Q96HJ3 373 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 MBOAT7Q96N66 472 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 ZNF214Q9UL59 606 aaPredicted RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 CYP3A4P08684 503 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 FKBP1BP68106 108 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 GHRHRQ02643 423 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 DMTNQ08495 405 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 TMEM132BQ14DG7 1078 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 MUM1L1Q5H9M0 696 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 KANK3Q6NY19 840 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 ELOA2Q8IYF1 753 aaPredicted RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 IQUBQ8NA54 791 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 TEX13BQ9BXU2 312 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 RAB34Q9BZG1 259 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 LOC285556D6RIA3 1793 aa9.79□□□□□ -0.84
THBS3-210ENST00000541576 COL11A1P12107 1806 aaPredicted RBP9.79□□□□□ -0.84
THBS3-210ENST00000541576 BIN1O00499 593 aa9.78□□□□□ -0.84
THBS3-210ENST00000541576 ATP2A1O14983 1001 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms