RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 PDE2AO00408 941 aaPredicted RBP16.74■□□□□ 0.27
VARS2-211ENST00000541562 EIF4A3P38919 411 aaKnown RBP16.74■□□□□ 0.27
VARS2-211ENST00000541562 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 MMTAG2Q9BU76 263 aaKnown RBP16.74■□□□□ 0.27
VARS2-211ENST00000541562 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 DAGLAQ9Y4D2 1042 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 TMCO5BA8MYB1 307 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 MYBL2P10244 700 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
VARS2-211ENST00000541562 RDH13Q8NBN7 331 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 COG1Q8WTW3 980 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
VARS2-211ENST00000541562 CAPN6Q9Y6Q1 641 aa16.74■□□□□ 0.27
VARS2-211ENST00000541562 H7C1D1 291 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.272e-8■■■■□ 24.4
VARS2-211ENST00000541562 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 CYP2W1Q8TAV3 490 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 CHD4Q14839 1912 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 GOLGA6L9A6NEM1 432 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 FTCDO95954 541 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 LDHCP07864 332 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 ACTN1P12814 892 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 ZSCAN5CA6NGD5 496 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 LGALS16A8MUM7 142 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 ZBTB39O15060 712 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 PDHBP11177 359 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 PRR16Q569H4 304 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 CERS5Q8N5B7 392 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
VARS2-211ENST00000541562 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
VARS2-211ENST00000541562 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 LRRC53A6NM62 1247 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 CLIC2O15247 247 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 CAPN2P17655 700 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 ADCY7P51828 1080 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 DCAF17Q5H9S7 520 aaPredicted RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 TMED8Q6PL24 325 aaPredicted RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 POTEGQ6S5H5 508 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 RABGGTAQ92696 567 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 ADAM21Q9UKJ8 722 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 SPA17Q15506 151 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 ADAT2Q7Z6V5 191 aaKnown RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 ZNF263O14978 683 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 PPP1R11O60927 126 aaPredicted RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 GABPB1Q06547 395 aaPredicted RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 GRB10Q13322 594 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 IFT81Q8WYA0 676 aa16.72■□□□□ 0.27
VARS2-211ENST00000541562 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
VARS2-211ENST00000541562 SORBS3O60504 671 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 GNA11P29992 359 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 POLR2FP61218 127 aaKnown RBP16.71■□□□□ 0.27
VARS2-211ENST00000541562 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
VARS2-211ENST00000541562 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
VARS2-211ENST00000541562 SAR1BQ9Y6B6 198 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 EPS15P42566 896 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 GNAQP50148 359 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 KRT79Q5XKE5 535 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 C10orf67Q8IYJ2 551 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
VARS2-211ENST00000541562 EHD4Q9H223 541 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
VARS2-211ENST00000541562 MYH10P35580 1976 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 PSMC6P62333 389 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 GSTO1P78417 241 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 SPAG1Q07617 926 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 SBK1Q52WX2 424 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 CHORDC1Q9UHD1 332 aaPredicted RBP16.71■□□□□ 0.26
VARS2-211ENST00000541562 DDX25Q9UHL0 483 aaKnown RBP16.71■□□□□ 0.26
VARS2-211ENST00000541562 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.26
VARS2-211ENST00000541562 RHBDL3P58872 404 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 DDR1Q08345 913 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 CASP8Q14790 479 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 HSP90B2PQ58FF3 399 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 SLC10A5Q5PT55 438 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 KCTD16Q68DU8 428 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 PIGOQ8TEQ8 1089 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 CLRN2A0PK11 232 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 GIMAP8Q8ND71 665 aaPredicted RBP16.7■□□□□ 0.26
VARS2-211ENST00000541562 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
VARS2-211ENST00000541562 SALL4Q9UJQ4 1053 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms