RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 SLC16A2P36021 539 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 SIAH1Q8IUQ4 282 aa16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-210ENST00000541286 MDM2Q00987 491 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 ZNF569Q5MCW4 686 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 MRIQ9BWK5 157 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 ZMYND10O75800 440 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 CASP14P31944 242 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 TMEM139Q8IV31 216 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 FOXP1Q9H334 677 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 SYNRGQ9UMZ2 1314 aa16.04■□□□□ 0.16
SFSWAP-210ENST00000541286 N4BP3O15049 544 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 KRT2P35908 639 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 MORC3Q14149 939 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 ENOX1Q8TC92 643 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 EXOC4Q96A65 974 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 UBXN6Q9BZV1 441 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 SRPRBQ9Y5M8 271 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 ACTN4O43707 911 aaKnown RBP16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 ABL1P00519 1130 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 CCDC175P0C221 793 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 TTLL12Q14166 644 aaPredicted RBP16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 JAKMIP3Q5VZ66 844 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 GPIHBP1Q8IV16 184 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
SFSWAP-210ENST00000541286 STX10O60499 249 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 LIG3P49916 1009 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 NLRP5P59047 1200 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 MAP3K9P80192 1104 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 ACRBPQ8NEB7 543 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 GOLGA1Q92805 767 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 PTGDRQ13258 359 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 MTMR14Q8NCE2 650 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 DCPSQ96C86 337 aaKnown RBP16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 DEF6Q9H4E7 631 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.16
SFSWAP-210ENST00000541286 FOCADQ5VW36 1801 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 ORC4O43929 436 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 ENTPD3O75355 529 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 FGRP09769 529 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 RAD9BQ6WBX8 426 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 SULF1Q8IWU6 871 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 PNMA1Q8ND90 353 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 PAGE5Q96GU1 130 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 KCND1Q9NSA2 647 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 MRFAP1Q9Y605 127 aa16.02■□□□□ 0.15
SFSWAP-210ENST00000541286 TXLNAP40222 546 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 SMCHD1A6NHR9 2005 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 SSC5DA1L4H1 1573 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 LAMB1P07942 1786 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 KIF5CO60282 957 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 GRM1Q13255 1194 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 TMTC2Q8N394 836 aa16.01■□□□□ 0.15
SFSWAP-210ENST00000541286 KANK3Q6NY19 840 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 LRRC31Q6UY01 552 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 SHISA4Q96DD7 197 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 EHD4Q9H223 541 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 FAM204AQ9H8W3 233 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 MTMR4Q9NYA4 1195 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 PHF20L1A8MW92 1017 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 TPM1P09493 284 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 ZNF18P17022 549 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 TTC38Q5R3I4 469 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 STK36Q9NRP7 1315 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 KCNJ6P48051 423 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 VSNL1P62760 191 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 TROAPQ12815 778 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 HSP90B2PQ58FF3 399 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
SFSWAP-210ENST00000541286 TEX2Q8IWB9 1127 aa16■□□□□ 0.15
SFSWAP-210ENST00000541286 MYH8P13535 1937 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms