RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 RXRAP19793 462 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
LTBR-209ENST00000541102 DUSP28Q4G0W2 176 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 CXCL17Q6UXB2 119 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
LTBR-209ENST00000541102 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 TM6SF1Q9BZW5 370 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 MYH6P13533 1939 aa16.48■□□□□ 0.23
LTBR-209ENST00000541102 ELP1O95163 1332 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 TRIM43BA6NCK2 446 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 DCDC2CA8MYV0 355 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 ZEB2O60315 1214 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
LTBR-209ENST00000541102 CLTBP09497 229 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 EDNRBP24530 442 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 PSMA5P28066 241 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
LTBR-209ENST00000541102 ANAPC15P60006 121 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
LTBR-209ENST00000541102 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 NSUN6Q8TEA1 469 aaKnown RBP16.47■□□□□ 0.23
LTBR-209ENST00000541102 BADQ92934 168 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 TRIM43Q96BQ3 446 aaPredicted RBP16.47■□□□□ 0.23
LTBR-209ENST00000541102 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 Q9Y3F1 56 aa16.47■□□□□ 0.23
LTBR-209ENST00000541102 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
LTBR-209ENST00000541102 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
LTBR-209ENST00000541102 DDAH1O94760 285 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 EIF2AK2P19525 551 aaKnown RBP16.46■□□□□ 0.23
LTBR-209ENST00000541102 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
LTBR-209ENST00000541102 KIF5BP33176 963 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 LIFRP42702 1097 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 NKX3-2P78367 333 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 SEPT14Q6ZU15 432 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 BRF1Q92994 677 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 MAF1Q9H063 256 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
LTBR-209ENST00000541102 ARVCFO00192 962 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 SOX1O00570 391 aaPredicted RBP16.45■□□□□ 0.22
LTBR-209ENST00000541102 OPLAHO14841 1288 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
LTBR-209ENST00000541102 RAG1P15918 1043 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 FAAP100Q0VG06 881 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 TRAF1Q13077 416 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 OR6J1Q8NGC5 347 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 COPS5Q92905 334 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 TOX2Q96NM4 488 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 AGXT2Q9BYV1 514 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 LRRC37A2A6NM11 1700 aa16.45■□□□□ 0.22
LTBR-209ENST00000541102 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
LTBR-209ENST00000541102 CABYRO75952 493 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 MYL3P08590 195 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 CDK7P50613 346 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 TTLL4Q14679 1199 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 STXBP2Q15833 593 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 ANKRD33Q7Z3H0 272 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
LTBR-209ENST00000541102 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
LTBR-209ENST00000541102 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 LZTS2Q9BRK4 669 aa16.44■□□□□ 0.22
LTBR-209ENST00000541102 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
LTBR-209ENST00000541102 KIAA0355O15063 1070 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 NR3C2P08235 984 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 CALM1P0DP23 149 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 CALM2P0DP24 149 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 CALM3P0DP25 149 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 MYCLP12524 364 aaPredicted RBP16.43■□□□□ 0.22
LTBR-209ENST00000541102 ITGB8P26012 769 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 GNAQP50148 359 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 HSD17B4P51659 736 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 PSMC6P62333 389 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 ITGA7Q13683 1181 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 FBXL16Q8N461 479 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
LTBR-209ENST00000541102 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 PXMP2Q9NR77 195 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms