RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 LCORLQ8N3X6 602 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 IQUBQ8NA54 791 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.83□□□□□ -0.84
TCF4-207ENST00000540999 SH3KBP1Q96B97 665 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 STRBPQ96SI9 672 aaKnown RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 DNAI2Q9GZS0 605 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 HOMER3Q9NSC5 361 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 DNAAF2Q9NVR5 837 aaKnown RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 POLG2Q9UHN1 485 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 COL4A3BPQ9Y5P4 624 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 MYH13Q9UKX3 1938 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 ENO4A6NNW6 628 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 SMIM22K7EJ46 135 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 ABL1P00519 1130 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 PSMA5P28066 241 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 UBXN2AP68543 259 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 STK3Q13188 491 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 RAB3GAP1Q15042 981 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 PTPN14Q15678 1187 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 EMC10Q5UCC4 262 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 ZSCAN25Q6NSZ9 544 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 NANOGNBQ7Z5D8 188 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 BICD2Q8TD16 824 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 WHAMMQ8TF30 809 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 GPHNQ9NQX3 736 aaPredicted RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 EVLQ9UI08 416 aaPredicted RBP9.83□□□□□ -0.84
TCF4-207ENST00000540999 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
TCF4-207ENST00000540999 A0A1B0GUA9 196 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 UFL1O94874 794 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 CYP7A1P22680 504 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 PRDX5P30044 214 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 NEK2P51955 445 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 MRPL12P52815 198 aaKnown RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 GRIK5Q16478 980 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 SYCP2LQ5T4T6 812 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 ARHGAP22Q7Z5H3 698 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 WDR75Q8IWA0 830 aaKnown RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 ZNF280CQ8ND82 737 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 EPB41L4AQ9HCS5 686 aaPredicted RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 XDHP47989 1333 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 KDM1AO60341 852 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 RPN1P04843 607 aaKnown RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 SRGNP10124 158 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 BTF3P20290 206 aaKnown RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 HALP42357 657 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 Q6ZUG5 572 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 KIAA1328Q86T90 577 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
TCF4-207ENST00000540999 ZNF75CPQ92670 426 aaPredicted RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.84
TCF4-207ENST00000540999 BRIP1Q9BX63 1249 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 SYNCQ9H7C4 482 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 CACNA1SQ13698 1873 aa9.82□□□□□ -0.84
TCF4-207ENST00000540999 COL11A2P13942 1736 aaPredicted RBP9.82□□□□□ -0.84
TCF4-207ENST00000540999 A0A1W2PRQ8 180 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 STXBP3O00186 592 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 STAM2O75886 525 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 UBASH3AP57075 661 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 DYNLL1P63167 89 aaKnown RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 SPECC1Q5M775 1068 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 SDR42E1Q8WUS8 393 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 SLC39A13Q96H72 371 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 KCTD5Q9NXV2 234 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 SEPT10Q9P0V9 454 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 CROTQ9UKG9 612 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 MKL2Q9ULH7 1088 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 COL6A1P12109 1028 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 SCG2P13521 617 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 YY1P25490 414 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 CORO7P57737 925 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 SNX16P57768 344 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 PAK2Q13177 524 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 PABPC4Q13310 644 aaKnown RBP eCLIP9.81□□□□□ -0.84
TCF4-207ENST00000540999 SHROOM1Q2M3G4 852 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 LRRC23Q53EV4 343 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 KAZNQ674X7 775 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 TBC1D10CQ8IV04 446 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 GBP7Q8N8V2 638 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 VCX3BQ9H321 246 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 AVENQ9NQS1 362 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 ST7Q9NRC1 585 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 ZNF219Q9P2Y4 722 aaPredicted RBP9.81□□□□□ -0.84
TCF4-207ENST00000540999 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 TACC3Q9Y6A5 838 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 SQORQ9Y6N5 450 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 NRXN2Q9P2S2 1712 aa9.81□□□□□ -0.84
TCF4-207ENST00000540999 TMEM238LA0A1B0GVL6 79 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 GRXCR2A6NFK2 248 aa9.8□□□□□ -0.84
TCF4-207ENST00000540999 SPDYE3A6NKU9 549 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms