RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PRODHO43272 600 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 LTBRP36941 435 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 RBM10P98175 930 aaKnown RBP9.34□□□□□ -0.91
YBX3-210ENST00000540975 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 PLEKHN1Q494U1 663 aaPredicted RBP9.34□□□□□ -0.91
YBX3-210ENST00000540975 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 CABP7Q86V35 215 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 ANKLE2Q86XL3 938 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 MKL1Q969V6 931 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 DRC1Q96MC2 740 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 DNAJC2Q99543 621 aaKnown RBP9.34□□□□□ -0.91
YBX3-210ENST00000540975 BTG4Q9NY30 223 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 MARCH2Q9P0N8 246 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 NPFFR2Q9Y5X5 522 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 HCFC2Q9Y5Z7 792 aa9.34□□□□□ -0.91
YBX3-210ENST00000540975 TRAV20A0A0B4J274 112 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 DBX1A6NMT0 343 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 PABPC1P11940 636 aaKnown RBP9.33□□□□□ -0.92
YBX3-210ENST00000540975 LCP1P13796 627 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
YBX3-210ENST00000540975 PRR5P85299 388 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
YBX3-210ENST00000540975 RASA3Q14644 834 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 ZC3H14Q6PJT7 736 aaKnown RBP9.33□□□□□ -0.92
YBX3-210ENST00000540975 NSMFQ6X4W1 530 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 LDHDQ86WU2 507 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 OSBP2Q969R2 916 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 DEPDC7Q96QD5 511 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 CD320Q9NPF0 282 aa9.33□□□□□ -0.92
YBX3-210ENST00000540975 TCAF2A6NFQ2 919 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 ADCY3O60266 1144 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 NTRK1P04629 796 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 BCL6P41182 706 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
YBX3-210ENST00000540975 CEP68Q76N32 757 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 CILP2Q8IUL8 1156 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 TEX2Q8IWB9 1127 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 NETO2Q8NC67 525 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
YBX3-210ENST00000540975 DBR1Q9UK59 544 aaKnown RBP9.32□□□□□ -0.92
YBX3-210ENST00000540975 C22orf46C9J442 243 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
YBX3-210ENST00000540975 CDR1P51861 262 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 GTF2A2P52657 109 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 ZBTB38Q8NAP3 1195 aaPredicted RBP9.31□□□□□ -0.92
YBX3-210ENST00000540975 MZB1Q8WU39 189 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 SRPK1Q96SB4 655 aaKnown RBP9.31□□□□□ -0.92
YBX3-210ENST00000540975 PCDHA2Q9Y5H9 948 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
YBX3-210ENST00000540975 NPIPB6E9PJ23 425 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 N4BP3O15049 544 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 MYO1BO43795 1136 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 EPHB3P54753 998 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 IFRD2Q12894 506 aaPredicted RBP9.3□□□□□ -0.92
YBX3-210ENST00000540975 LSAMPQ13449 338 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 KCNA10Q16322 511 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 WWC2Q6AWC2 1192 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 USP53Q70EK8 1073 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 PEX11GQ96HA9 241 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 GPR27Q9NS67 375 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 PCDHA5Q9Y5H7 936 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 KDM2BQ8NHM5 1336 aa9.3□□□□□ -0.92
YBX3-210ENST00000540975 FAM153BP0C7A2 387 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 ZNF200P98182 395 aaPredicted RBP9.29□□□□□ -0.92
YBX3-210ENST00000540975 SCUBE1Q8IWY4 988 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 TRMT2BQ96GJ1 504 aaKnown RBP9.29□□□□□ -0.92
YBX3-210ENST00000540975 TMEM169Q96HH4 297 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 DNAJC7Q99615 494 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 FBXL7Q9UJT9 491 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 X6R8D5 127 aa9.29□□□□□ -0.92
YBX3-210ENST00000540975 FPR2P25090 351 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 NCKAP1LP55160 1127 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 NTRK3Q16288 839 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 FOXB2Q5VYV0 432 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 IGDCC3Q8IVU1 814 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 Q8N1Y9 231 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 DCAF4Q8WV16 495 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 NUDT5Q9UKK9 219 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 SIT1Q9Y3P8 196 aa9.28□□□□□ -0.92
YBX3-210ENST00000540975 BLACEA4D250 179 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 CFPP27918 469 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 SLC9A5Q14940 896 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 FAM209AQ5JX71 171 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 RSPO2Q6UXX9 243 aaPredicted RBP9.27□□□□□ -0.93
YBX3-210ENST00000540975 RIOX2Q8IUF8 465 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 UBXN4Q92575 508 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 TSPAN17Q96FV3 270 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 SIGLEC10Q96LC7 697 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 TOX2Q96NM4 488 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 OSBPL2Q9H1P3 480 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 CNOT6Q9ULM6 557 aaKnown RBP9.27□□□□□ -0.93
YBX3-210ENST00000540975 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
YBX3-210ENST00000540975 H7BY64 318 aa9.26□□□□□ -0.93
YBX3-210ENST00000540975 MSCO60682 206 aa9.26□□□□□ -0.93
YBX3-210ENST00000540975 ZBTB7AO95365 584 aa9.26□□□□□ -0.93
YBX3-210ENST00000540975 LINC00310P59036 64 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms