RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 BMP2KLQ5H9B9 411 aa24.37■■□□□ 1.49
CHFR-217ENST00000540537 FAM109BQ6ICB4 259 aaPredicted RBP24.37■■□□□ 1.49
CHFR-217ENST00000540537 Q7L0L9 218 aa24.37■■□□□ 1.49
CHFR-217ENST00000540537 CATIPQ7Z7H3 387 aa24.37■■□□□ 1.49
CHFR-217ENST00000540537 RMDN3Q96TC7 470 aa24.37■■□□□ 1.49
CHFR-217ENST00000540537 MTA3Q9BTC8 594 aa24.37■■□□□ 1.49
CHFR-217ENST00000540537 PPP1R11O60927 126 aaPredicted RBP24.36■■□□□ 1.49
CHFR-217ENST00000540537 HSD17B4P51659 736 aa24.36■■□□□ 1.49
CHFR-217ENST00000540537 SLC35G1Q2M3R5 365 aa24.36■■□□□ 1.49
CHFR-217ENST00000540537 BRDTQ58F21 947 aaPredicted RBP24.36■■□□□ 1.49
CHFR-217ENST00000540537 SAMD3Q8N6K7 520 aa24.36■■□□□ 1.49
CHFR-217ENST00000540537 MAP3K20Q9NYL2 800 aaKnown RBP24.36■■□□□ 1.49
CHFR-217ENST00000540537 PCDHA1Q9Y5I3 950 aa24.36■■□□□ 1.49
CHFR-217ENST00000540537 KIAA1217Q5T5P2 1943 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 SCN10AQ9Y5Y9 1956 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 OPLAHO14841 1288 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 CFBP00751 764 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 TXNP10599 105 aaKnown RBP24.35■■□□□ 1.49
CHFR-217ENST00000540537 PURAQ00577 322 aaKnown RBP24.35■■□□□ 1.49
CHFR-217ENST00000540537 STXBP2Q15833 593 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 ARHGEF16Q5VV41 709 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 RNPC3Q96LT9 517 aaKnown RBP24.35■■□□□ 1.49
CHFR-217ENST00000540537 MTMR10Q9NXD2 777 aa24.35■■□□□ 1.49
CHFR-217ENST00000540537 PSMC6P62333 389 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 PPIGQ13427 754 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHFR-217ENST00000540537 CASC1Q6TDU7 716 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 HOMER1Q86YM7 354 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 COPS5Q92905 334 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 PIGSQ96S52 555 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 MAP3K14Q99558 947 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 LY9Q9HBG7 655 aa24.34■■□□□ 1.49
CHFR-217ENST00000540537 A6NJR5 290 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 SLC27A2O14975 620 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 CYTH3O43739 400 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 KPNA6O60684 536 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 ARIH2O95376 493 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 MYL3P08590 195 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 SMAD3P84022 425 aaKnown RBP24.33■■□□□ 1.49
CHFR-217ENST00000540537 CCDC62Q6P9F0 684 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 TMEM199Q8N511 208 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 MTG1Q9BT17 334 aaPredicted RBP24.33■■□□□ 1.49
CHFR-217ENST00000540537 PPP1R12CQ9BZL4 782 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 GPHNQ9NQX3 736 aaPredicted RBP24.33■■□□□ 1.49
CHFR-217ENST00000540537 PXMP2Q9NR77 195 aa24.33■■□□□ 1.49
CHFR-217ENST00000540537 COL6A3P12111 3177 aa24.33■■□□□ 1.48
CHFR-217ENST00000540537 PNMA6FA0A0J9YX94 578 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 PRC1O43663 620 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 DDAH1O94760 285 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 EIF2AK2P19525 551 aaKnown RBP24.32■■□□□ 1.48
CHFR-217ENST00000540537 MCM5P33992 734 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 NECTIN1Q15223 517 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 CREB3L3Q68CJ9 461 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 SEPT14Q6ZU15 432 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 TMEM87BQ96K49 555 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 ALDH8A1Q9H2A2 487 aaPredicted RBP24.32■■□□□ 1.48
CHFR-217ENST00000540537 ANO2Q9NQ90 1003 aa24.32■■□□□ 1.48
CHFR-217ENST00000540537 B4GALT4O60513 344 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 EIF3JO75822 258 aaKnown RBP24.31■■□□□ 1.48
CHFR-217ENST00000540537 NR3C2P08235 984 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 SKAP1Q86WV1 359 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 ZNF654Q8IZM8 581 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 TMTC2Q8N394 836 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 TRPV6Q9H1D0 765 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 HIPK3Q9H422 1215 aa24.31■■□□□ 1.48
CHFR-217ENST00000540537 SH2B2O14492 632 aaPredicted RBP24.3■■□□□ 1.48
CHFR-217ENST00000540537 GH1P01241 217 aa24.3■■□□□ 1.48
CHFR-217ENST00000540537 CSF2RAP15509 400 aa24.3■■□□□ 1.48
CHFR-217ENST00000540537 KIF5BP33176 963 aa24.3■■□□□ 1.48
CHFR-217ENST00000540537 ZNF697Q5TEC3 545 aa24.3■■□□□ 1.48
CHFR-217ENST00000540537 CTCFLQ8NI51 663 aaPredicted RBP24.3■■□□□ 1.48
CHFR-217ENST00000540537 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.3■■□□□ 1.48
CHFR-217ENST00000540537 CYP2C18P33260 490 aa24.29■■□□□ 1.48
CHFR-217ENST00000540537 LY6KQ17RY6 165 aa24.29■■□□□ 1.48
CHFR-217ENST00000540537 PDCD2LQ9BRP1 358 aa24.29■■□□□ 1.48
CHFR-217ENST00000540537 NOC4LQ9BVI4 516 aaKnown RBP24.29■■□□□ 1.48
CHFR-217ENST00000540537 SPZ1Q9BXG8 430 aa24.29■■□□□ 1.48
CHFR-217ENST00000540537 STXBP5LQ9Y2K9 1186 aa24.29■■□□□ 1.48
CHFR-217ENST00000540537 GCOM1H8Y6P7 765 aaPredicted RBP24.28■■□□□ 1.48
CHFR-217ENST00000540537 SUPT20HL2P0C7V6 817 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 POLR2MP0CAP2 368 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 SMARCA1P28370 1054 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 HOXA13P31271 388 aaPredicted RBP24.28■■□□□ 1.48
CHFR-217ENST00000540537 LIFRP42702 1097 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 ARHGAP1Q07960 439 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 TMEM240Q5SV17 173 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 PSRC1Q6PGN9 363 aaPredicted RBP24.28■■□□□ 1.48
CHFR-217ENST00000540537 C16orf59Q7L2K0 433 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 LZTS2Q9BRK4 669 aa24.28■■□□□ 1.48
CHFR-217ENST00000540537 CCDC69A6NI79 296 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 NBPF20Q3BBV1 942 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 NFRKBQ6P4R8 1299 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 NFXL1Q6ZNB6 911 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 AFG1LQ8WV93 481 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 MYL10Q9BUA6 226 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 IL23AQ9NPF7 189 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 TRMT13Q9NUP7 481 aaKnown RBP24.27■■□□□ 1.48
CHFR-217ENST00000540537 DDX41Q9UJV9 622 aaKnown RBP24.27■■□□□ 1.48
CHFR-217ENST00000540537 UMODL1Q5DID0 1318 aa24.27■■□□□ 1.48
CHFR-217ENST00000540537 MMP3P08254 477 aa24.26■■□□□ 1.47
CHFR-217ENST00000540537 GNAQP50148 359 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms