RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PDE1AP54750 535 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 GABPAQ06546 454 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 NBPF20Q3BBV1 942 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 SLC9C2Q5TAH2 1124 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 ARMCX2Q7L311 632 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 ASCL5Q7RTU5 278 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 CHD1LQ86WJ1 897 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 SPICE1Q8N0Z3 855 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 MIGA1Q8NAN2 632 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 MTUS1Q9ULD2 1270 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 PPP1R9AQ9ULJ8 1098 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 ASTN1O14525 1302 aa10.56□□□□□ -0.72
TRAPPC1-202ENST00000540486 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 PRR23AA6NEV1 266 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 GJB5O95377 273 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 PLCD1P51178 756 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 EMP3P54852 163 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 WDR5P61964 334 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 PSMC6P62333 389 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 SIAH1Q8IUQ4 282 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 REPS2Q8NFH8 660 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 RIOK1Q9BRS2 568 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 TRMT13Q9NUP7 481 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 ZNF532Q9HCE3 1301 aa10.55□□□□□ -0.72
TRAPPC1-202ENST00000540486 MYO15AQ9UKN7 3530 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 DYNC1LI2O43237 492 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 POLR3DP05423 398 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 AVPR2P30518 371 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 ZXDAP98168 799 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 BFSP2Q13515 415 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 LRRFIP1Q32MZ4 808 aaKnown RBP10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 CCDC144CPQ8IYA2 1237 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 FSD1Q9BTV5 496 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
TRAPPC1-202ENST00000540486 H0Y858 1186 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 ATP2A1O14983 1001 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 NBL1P41271 181 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 IQSEC1Q6DN90 963 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 SNRNP48Q6IEG0 339 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 ANKRD35Q8N283 1001 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 SAMD11Q96NU1 681 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 PUS7LQ9H0K6 701 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 TLR9Q9NR96 1032 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 FBXO40Q9UH90 709 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 FOCADQ5VW36 1801 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
TRAPPC1-202ENST00000540486 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 MBTPS2O43462 519 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 EFCAB14O75071 495 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 PARNO95453 639 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 ICA1Q05084 483 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 SIGLEC14Q08ET2 396 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 TCEAL5Q5H9L2 206 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 LCORLQ8N3X6 602 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 OSBP2Q969R2 916 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 FGD4Q96M96 766 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 CLDND1Q9NY35 253 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 SWAP70Q9UH65 585 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 RIPK3Q9Y572 518 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 INSL6Q9Y581 213 aa10.52□□□□□ -0.73
TRAPPC1-202ENST00000540486 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 ASB14A6NK59 587 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 STXBP3O00186 592 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 RNF113AO15541 343 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 PRKAB2O43741 272 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 SMPD1P17405 629 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 LTBRP36941 435 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 DEFB103AP81534 67 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 CNKSR3Q6P9H4 555 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 CHST13Q8NET6 341 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 CCDC17Q96LX7 622 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 ARMT1Q9H993 441 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms