RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
CBX3P4-202ENST00000540428 OSBPL3Q9H4L5 887 aa14.07□□□□□ -0.16
CBX3P4-202ENST00000540428 NEDD4P46934 1319 aa14.07□□□□□ -0.16
CBX3P4-202ENST00000540428 SPTBN5Q9NRC6 3674 aaKnown RBP14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 ZBBXA8MT70 800 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 ACTN1P12814 892 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 IGFBP4P22692 258 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 BFSP2Q13515 415 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 FAM47CQ5HY64 1035 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 PNMA1Q8ND90 353 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 PHOSPHO2Q8TCD6 241 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 ABCB11O95342 1321 aa14.06□□□□□ -0.16
CBX3P4-202ENST00000540428 TTC28Q96AY4 2481 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 TNFRSF10AO00220 468 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 GOLGA8HP0CJ92 632 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 RABGGTBP53611 331 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 MRPS5P82675 430 aaKnown RBP14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 CDC37Q16543 378 aaPredicted RBP14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 USH1GQ495M9 461 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 ASPRV1Q53RT3 343 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 DEFB128Q7Z7B8 93 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 COPS5Q92905 334 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 SLC9A7Q96T83 725 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 ZKSCAN3Q9BRR0 538 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 UBA5Q9GZZ9 404 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 RWDD1Q9H446 243 aaPredicted RBP14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
CBX3P4-202ENST00000540428 HIP1O00291 1037 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 ARIH2O95376 493 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 TMEM67Q5HYA8 995 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 SESTD1Q86VW0 696 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 CHD1LQ86WJ1 897 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 SYTL5Q8TDW5 730 aaPredicted RBP14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 NSUN6Q8TEA1 469 aaKnown RBP14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 IWS1Q96ST2 819 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 KAT14Q9H8E8 782 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
CBX3P4-202ENST00000540428 KDM4AO75164 1064 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 BAIAP3O94812 1187 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 GH1P01241 217 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 MYOGP15173 224 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 STXBP2Q15833 593 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 CCDC85BQ15834 202 aaPredicted RBP14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 PLEKHM2Q8IWE5 1019 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 ADGRF4Q8IZF3 695 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 CPVLQ9H3G5 476 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 DIAPH3Q9NSV4 1193 aa14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 MRPL11Q9Y3B7 192 aaKnown RBP14.03□□□□□ -0.16
CBX3P4-202ENST00000540428 B4E1Z4 1266 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 PARNO95453 639 aaKnown RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CA3P07451 260 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 MMP3P08254 477 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 PARP1P09874 1014 aaKnown RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CASTP20810 708 aaKnown RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 NUCB1Q02818 461 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 ARHGAP1Q07960 439 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 QRICH1Q2TAL8 776 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CWC27Q6UX04 472 aaKnown RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 FBXO11Q86XK2 927 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 ENAHQ8N8S7 591 aaPredicted RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 AFAP1L1Q8TED9 768 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 AFG1LQ8WV93 481 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 TBC1D5Q92609 795 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 EMID1Q96A84 441 aaPredicted RBP14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 TAAR1Q96RJ0 339 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 RMDN3Q96TC7 470 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 KRT23Q9C075 422 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CNNM2Q9H8M5 875 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 ZSWIM5Q9P217 1185 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 COL20A1Q9P218 1284 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.17
CBX3P4-202ENST00000540428 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 GHRHRQ02643 423 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 RBL2Q08999 1139 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 PTGISQ16647 500 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 LY6KQ17RY6 165 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 IL27Q8NEV9 243 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 KAT2BQ92831 832 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 FTOQ9C0B1 505 aaKnown RBP eCLIP14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 JMJD4Q9H9V9 463 aa14.01□□□□□ -0.17
CBX3P4-202ENST00000540428 MAP3K20Q9NYL2 800 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms