RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 TRIM4Q9C037 500 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 MAF1Q9H063 256 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 GPR108Q9NPR9 543 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 MYH3P11055 1940 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 SALL1Q9NSC2 1324 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 WTIPA6NIX2 430 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 EIF4E1BA6NMX2 242 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 HIP1O00291 1037 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 ZNF185O15231 689 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.738e-6■■■□□ 16.4
CTNNA1-243ENST00000540387 NUGGCQ68CJ6 796 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 CACNA2D3Q8IZS8 1091 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 ENOX1Q8TC92 643 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 P3H4Q92791 437 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 C8orf76Q96K31 380 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 MMADHCQ9H3L0 296 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
CTNNA1-243ENST00000540387 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 LUC7L3O95232 432 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 MARCKSP29966 332 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 ADORA1P30542 326 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 PBX1P40424 430 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 GRAPQ13588 217 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 OTUD7BQ6GQQ9 843 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 ARMCX6Q7L4S7 300 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 PNMA8AQ86V59 439 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 CNGA4Q8IV77 575 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 TEKT4Q8WW24 435 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 CAVIN3Q969G5 261 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 RBM17Q96I25 401 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 NDST4Q9H3R1 872 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 NCOA5Q9HCD5 579 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 ZMYM6O95789 1325 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 RIC1Q4ADV7 1423 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 MAP3K13O43283 966 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 GYPCP04921 128 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 ITGB3BPQ13352 177 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 GLE1Q53GS7 698 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 FKBP15Q5T1M5 1219 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 SDCCAG8Q86SQ7 713 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 TRIM42Q8IWZ5 723 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 IQCKQ8N0W5 287 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 CCDC63Q8NA47 563 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 CCDC51Q96ER9 411 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 MED15Q96RN5 788 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 SLX1AQ9BQ83 275 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 LRRC1Q9BTT6 524 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 BOLA2Q9H3K6 86 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 PANK4Q9NVE7 773 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 MED23Q9ULK4 1368 aa10.47□□□□□ -0.73
CTNNA1-243ENST00000540387 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 STXBP3O00186 592 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 SRGNP10124 158 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 HOXA10P31260 410 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 MRPS25P82663 173 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 SLC7A5Q01650 507 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 CFAP58Q5T655 872 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 ANO1Q5XXA6 986 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 MMGT1Q8N4V1 131 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 ATP6V1G3Q96LB4 118 aa10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 CCDC43Q96MW1 224 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 REXO2Q9Y3B8 237 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 TNRC6CQ9HCJ0 1690 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-243ENST00000540387 TAF1P21675 1872 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 SPDYE5A6NIY4 337 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 TRAPPC3O43617 180 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 MXRA7P84157 204 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 IQCEQ6IPM2 695 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 CYP26C1Q6V0L0 522 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 RUBCNQ92622 972 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 GPATCH3Q96I76 525 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 WDR35Q9P2L0 1181 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 C2CD2Q9Y426 696 aa10.46□□□□□ -0.74
CTNNA1-243ENST00000540387 C5orf60A6NFR6 353 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 FOXN1O15353 648 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 FGFR2P21802 821 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 HPDP32754 393 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 MAGEA10P43363 369 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 PPARDQ03181 441 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 DBN1Q16643 649 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 ZMYM1Q5SVZ6 1142 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 ACBD5Q5T8D3 534 aaPredicted RBP10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 SLC9C2Q5TAH2 1124 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 SHC4Q6S5L8 630 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 SYNE3Q6ZMZ3 975 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
CTNNA1-243ENST00000540387 YIPF2Q9BWQ6 316 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms