RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 USP17L19D6RCP7 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L20D6RJB6 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 MOCS3O95396 460 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 LDHCP07864 332 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 PDHBP11177 359 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 GNA11P29992 359 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L24Q0WX57 530 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 GRB10Q13322 594 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CASP8Q14790 479 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 MIIPQ5JXC2 388 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 USP17L6PQ6QN14 398 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
BNIP3-202ENST00000540159 IRS2Q9Y4H2 1338 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 SAR1BQ9Y6B6 198 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 CAPN6Q9Y6Q1 641 aa15.23■□□□□ 0.03
BNIP3-202ENST00000540159 EEF1GP26641 437 aaKnown RBP15.22■□□□□ 0.03
BNIP3-202ENST00000540159 CT47A1Q5JQC4 288 aaPredicted RBP15.22■□□□□ 0.03
BNIP3-202ENST00000540159 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 CCDC47Q96A33 483 aaKnown RBP15.22■□□□□ 0.03
BNIP3-202ENST00000540159 SNED1Q8TER0 1413 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 SRGNP10124 158 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 MYBL2P10244 700 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 RHBDL3P58872 404 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 AMPD2Q01433 879 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 TDRD12Q587J7 1177 aaKnown RBP15.22■□□□□ 0.03
BNIP3-202ENST00000540159 THAP9Q9H5L6 903 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 LAMB2P55268 1798 aa15.22■□□□□ 0.03
BNIP3-202ENST00000540159 TRIM14Q14142 442 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 DDX12PQ92771 950 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 DNAJC7Q99615 494 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 USP21Q9UK80 565 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 AKR1B10O60218 316 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 STAT3P40763 770 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 KCNB1Q14721 858 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 BRD3Q15059 726 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 NEDD1Q8NHV4 660 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
BNIP3-202ENST00000540159 PNMA5Q96PV4 448 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 KCNQ5Q9NR82 932 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 CASZ1Q86V15 1759 aa15.21■□□□□ 0.03
BNIP3-202ENST00000540159 KIAA1551Q9HCM1 1747 aa15.21■□□□□ 0.02
BNIP3-202ENST00000540159 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.02
BNIP3-202ENST00000540159 CCDC66A2RUB6 948 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 USP17L10C9JJH3 530 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 KRT86O43790 486 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 SERPINB2P05120 415 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 HDXQ7Z353 690 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 HDAC7Q8WUI4 952 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 L1RE1Q9UN81 338 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 DAGLAQ9Y4D2 1042 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 E9PMD0 336 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 ERLIN1O75477 346 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 ADCY7P51828 1080 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 GFPT1Q06210 699 aaPredicted RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 COG1Q8WTW3 980 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 HAUS4Q9H6D7 363 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 CYLC1P35663 651 aaPredicted RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 KIF5AQ12840 1032 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 NFIAQ12857 509 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 WHAMMP3Q1A5X7 153 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 NFRKBQ6P4R8 1299 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 ZFPM1Q8IX07 1006 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 SPZ1Q9BXG8 430 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
BNIP3-202ENST00000540159 ARHGAP20Q9P2F6 1191 aa15.2■□□□□ 0.02
BNIP3-202ENST00000540159 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
BNIP3-202ENST00000540159 MEIS1O00470 390 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 EDIL3O43854 480 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 SPA17Q15506 151 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 FOXR1Q6PIV2 292 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 ADGRF4Q8IZF3 695 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 TBC1D16Q8TBP0 767 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
BNIP3-202ENST00000540159 NDST4Q9H3R1 872 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 BCAS3Q9H6U6 928 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 GPR75-ASB3A0A0A6YYF3 556 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 TRAF5O00463 557 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 CAPN2P17655 700 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 CACNA2D4Q7Z3S7 1137 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 ZNF287Q9HBT7 754 aa15.19■□□□□ 0.02
BNIP3-202ENST00000540159 PACSIN2Q9UNF0 486 aaPredicted RBP15.19■□□□□ 0.02
BNIP3-202ENST00000540159 BICDL2A1A5D9 508 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 FECHP22830 423 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.026e-6■□□□□ 10.6
BNIP3-202ENST00000540159 PPP4CP60510 307 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 RASSF7Q02833 373 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 CNNM4Q6P4Q7 775 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
BNIP3-202ENST00000540159 TTYH3Q9C0H2 523 aa15.18■□□□□ 0.02
BNIP3-202ENST00000540159 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms