RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FERMT2Q96AC1 680 aa21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 LARP6Q9BRS8 491 aaKnown RBP21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 PXMP2Q9NR77 195 aa21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 MAP3K20Q9NYL2 800 aaKnown RBP21.14■□□□□ 0.97
SNRPA1-203ENST00000540017 RBM47A0AV96 593 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 GCOM1H8Y6P7 765 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 POLR2MP0CAP2 368 aa21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 ATN1P54259 1190 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 GJA9P57773 515 aa21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 PRPF38BQ5VTL8 546 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 ARHGEF16Q5VV41 709 aa21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 NOL8Q76FK4 1167 aaKnown RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 SAMD3Q8N6K7 520 aa21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 GPKOWQ92917 476 aaPredicted RBP eCLIP21.13■□□□□ 0.974e-9■■■□□ 16.8
SNRPA1-203ENST00000540017 PHF24Q9UPV7 400 aa21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 V9GY48 417 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-203ENST00000540017 NID2Q14112 1375 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 H0YGN5 161 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 EVI5O60447 810 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 C6orf222P0C671 652 aaPredicted RBP21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 PDIA3P30101 505 aaKnown RBP21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 KCNA10Q16322 511 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 USP17L6PQ6QN14 398 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 FCHSD1Q86WN1 690 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 IL31RAQ8NI17 732 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 IWS1Q96ST2 819 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 WDR11Q9BZH6 1224 aa21.12■□□□□ 0.97
SNRPA1-203ENST00000540017 MEIS2O14770 477 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 DYNC1LI2O43237 492 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 ARIH2O95376 493 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 NR3C2P08235 984 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 CST5P28325 142 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 ANAPC15P60006 121 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 NKX3-2P78367 333 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 BEX3Q00994 111 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 DUSP28Q4G0W2 176 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 WWC2Q6AWC2 1192 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 TYW1BQ6NUM6 668 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 HEATR3Q7Z4Q2 680 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 TLK2Q86UE8 772 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 C7orf61Q8IZ16 206 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 IL17RAQ96F46 866 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 MPHOSPH6Q99547 160 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 PDCD2LQ9BRP1 358 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 NCOA5Q9HCD5 579 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 PDRG1Q9NUG6 133 aa21.11■□□□□ 0.97
SNRPA1-203ENST00000540017 B4DLN1 442 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 MRPL12P52815 198 aaKnown RBP21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 ACLYP53396 1101 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 PPP2R5BQ15173 497 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 STXBP2Q15833 593 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 SLC39A5Q6ZMH5 540 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 COPS5Q92905 334 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 TSEN34Q9BSV6 310 aaKnown RBP21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 PCDH10Q9P2E7 1040 aa21.1■□□□□ 0.97
SNRPA1-203ENST00000540017 A0A1W2PQ45 241 aaPredicted RBP21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 A0A1W2PQY0 241 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 PPFIA3O75145 1194 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 CCT2P78371 535 aaKnown RBP21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 PGM5Q15124 567 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 NTRK3Q16288 839 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 GNASQ5JWF2 1037 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 SEPT14Q6ZU15 432 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 SCFD2Q8WU76 684 aa21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 ZFP91Q96JP5 570 aaPredicted RBP21.09■□□□□ 0.97
SNRPA1-203ENST00000540017 CCDC196A0A1B0GTZ2 297 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 PIK3CDO00329 1044 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 RGS20O76081 388 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 ASGR1P07306 291 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 MYCLP12524 364 aaPredicted RBP21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 CCDC62Q6P9F0 684 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 VSIG10LQ86VR7 867 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 PSTPIP2Q9H939 334 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 SPC25Q9HBM1 224 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 Q9Y3F1 56 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 NR2E3Q9Y5X4 410 aa21.08■□□□□ 0.97
SNRPA1-203ENST00000540017 FRMPD4Q14CM0 1322 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 STXBP3O00186 592 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 EIF3JO75822 258 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 TXNP10599 105 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 RTP1P59025 263 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 SNX17Q15036 470 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 PKN1Q16512 942 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 FSCN1Q16658 493 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 UBE2SQ16763 222 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 SMARCC2Q8TAQ2 1214 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 PHKBQ93100 1093 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 ZNF274Q96GC6 653 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 AP5M1Q9H0R1 490 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 ZMYND8Q9ULU4 1186 aaPredicted RBP21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 KIAA1217Q5T5P2 1943 aa21.07■□□□□ 0.96
SNRPA1-203ENST00000540017 MOXD2PA6NHM9 499 aa21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 EIF5BO60841 1220 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 LY6KQ17RY6 165 aa21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 PCSK9Q8NBP7 692 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 CUL5Q93034 780 aa21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
SNRPA1-203ENST00000540017 PRPF3O43395 683 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-203ENST00000540017 SYN1P17600 705 aa21.05■□□□□ 0.96
SNRPA1-203ENST00000540017 NAPAP54920 295 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms