RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MED15Q96RN5 788 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 KBTBD4Q9NVX7 518 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 MRPL11Q9Y3B7 192 aaKnown RBP25.27■■□□□ 1.64
HOMER3-204ENST00000539827 DOCK1Q14185 1865 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 PIK3CDO00329 1044 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 PTGS1P23219 599 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 SREBF1P36956 1147 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 FANCCQ00597 558 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 SPP2Q13103 211 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 CCDC186Q7Z3E2 898 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 NUDT12Q9BQG2 462 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 SLF1Q9BQI6 1058 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 XPO4Q9C0E2 1151 aaKnown RBP25.27■■□□□ 1.64
HOMER3-204ENST00000539827 CUEDC2Q9H467 287 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 EMILIN3Q9NT22 766 aa25.27■■□□□ 1.64
HOMER3-204ENST00000539827 ENOX1Q8TC92 643 aaKnown RBP25.26■■□□□ 1.63
HOMER3-204ENST00000539827 SNX29Q8TEQ0 813 aa25.26■■□□□ 1.63
HOMER3-204ENST00000539827 AGBL1Q96MI9 1066 aa25.26■■□□□ 1.63
HOMER3-204ENST00000539827 PPP1R3GB7ZBB8 358 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 GCOM1H8Y6P7 765 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-204ENST00000539827 POLR2MP0CAP2 368 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 PRR16Q569H4 304 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 MOXD1Q6UVY6 613 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 TANGO6Q9C0B7 1094 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 PICK1Q9NRD5 415 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 PCDHA12Q9UN75 941 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 ABCB11O95342 1321 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 STX17P56962 302 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 PRKG1Q13976 671 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 DHX8Q14562 1220 aaKnown RBP25.25■■□□□ 1.63
HOMER3-204ENST00000539827 HSP90AA4PQ58FG1 418 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 KRT79Q5XKE5 535 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 PRPF38AQ8NAV1 312 aaKnown RBP25.25■■□□□ 1.63
HOMER3-204ENST00000539827 CDK5RAP3Q96JB5 506 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 KCNMB3Q9NPA1 279 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 NFE2L3Q9Y4A8 694 aa25.25■■□□□ 1.63
HOMER3-204ENST00000539827 POLR2AP24928 1970 aaKnown RBP25.24■■□□□ 1.63
HOMER3-204ENST00000539827 PTPRAP18433 802 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 ERCC5P28715 1186 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-204ENST00000539827 CCDC144BQ3MJ40 725 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 DLK2Q6UY11 383 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 KCNF1Q9H3M0 494 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 MAGEF1Q9HAY2 307 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 RMND1Q9NWS8 449 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 CCPG1Q9ULG6 757 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 TPM3P06753 285 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 VCAM1P19320 739 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 C9orf131Q5VYM1 1079 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 WDR18Q9BV38 432 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 PPP2R3BQ9Y5P8 575 aa25.24■■□□□ 1.63
HOMER3-204ENST00000539827 ZNF536O15090 1300 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 FAM86B1E9PN63 330 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 KLRC4O43908 158 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 FAM86B2P0C5J1 330 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 KMT5BQ4FZB7 885 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 Q4G0T1 1027 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 RPAP3Q9H6T3 665 aaPredicted RBP25.23■■□□□ 1.63
HOMER3-204ENST00000539827 AS3MTQ9HBK9 375 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 GDAQ9Y2T3 454 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 SSC5DA1L4H1 1573 aa25.23■■□□□ 1.63
HOMER3-204ENST00000539827 FLOT1O75955 427 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ICAM1P05362 532 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 CLCN1P35523 988 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ZNF76P36508 570 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 USP14P54578 494 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 CT47A1Q5JQC4 288 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ZNF658Q5TYW1 1059 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-204ENST00000539827 CPXCR1Q8N123 301 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 KLRG1Q96E93 195 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ADARB2Q9NS39 739 aaKnown RBP25.22■■□□□ 1.63
HOMER3-204ENST00000539827 BLOC1S4Q9NUP1 217 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 CTNND2Q9UQB3 1225 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 COBLO75128 1261 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 SERPINC1P01008 464 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 BACE1P56817 501 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 MCM6Q14566 821 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ZNF280CQ8ND82 737 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-204ENST00000539827 ZHX2Q9Y6X8 837 aa25.22■■□□□ 1.63
HOMER3-204ENST00000539827 MYL1P05976 194 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 CYP3A4P08684 503 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 CIITAP33076 1130 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 STAT3P40763 770 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 UBXN2AP68543 259 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 ECM1Q16610 540 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 CYP2W1Q8TAV3 490 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 ETNPPLQ8TBG4 499 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 LENG9Q96B70 501 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 RAVER2Q9HCJ3 691 aaKnown RBP25.21■■□□□ 1.63
HOMER3-204ENST00000539827 SAMSN1Q9NSI8 373 aaKnown RBP25.21■■□□□ 1.63
HOMER3-204ENST00000539827 SYNRGQ9UMZ2 1314 aa25.21■■□□□ 1.63
HOMER3-204ENST00000539827 SUPT20HL1Q3ZLR7 823 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 TMEM119Q4V9L6 283 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 SLFN12Q8IYM2 578 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 C7orf25Q9BPX7 421 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 TRIM9Q9C026 710 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 STK17AQ9UEE5 414 aa25.2■■□□□ 1.63
HOMER3-204ENST00000539827 CCT6AP40227 531 aaKnown RBP25.2■■□□□ 1.62
HOMER3-204ENST00000539827 UBASH3AP57075 661 aa25.2■■□□□ 1.62
HOMER3-204ENST00000539827 KCNB1Q14721 858 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms