RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC26A6Q9BXS9 759 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 ABHD16BQ9H3Z7 469 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 NRBP1Q9UHY1 535 aa18.17■□□□□ 0.5
RPAIN-206ENST00000539417 PRPF3O43395 683 aaKnown RBP18.16■□□□□ 0.5
RPAIN-206ENST00000539417 PFKFB2O60825 505 aa18.16■□□□□ 0.5
RPAIN-206ENST00000539417 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
RPAIN-206ENST00000539417 ADCYAP1R1P41586 468 aa18.16■□□□□ 0.5
RPAIN-206ENST00000539417 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
RPAIN-206ENST00000539417 DNERQ8NFT8 737 aa18.16■□□□□ 0.5
RPAIN-206ENST00000539417 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
RPAIN-206ENST00000539417 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
RPAIN-206ENST00000539417 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
RPAIN-206ENST00000539417 BARHL2Q9NY43 387 aa18.15■□□□□ 0.5
RPAIN-206ENST00000539417 PGK1P00558 417 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 SCG2P13521 617 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 AKR1A1P14550 325 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 NAPAP54920 295 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 TRAF1Q13077 416 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 ANKRD1Q15327 319 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 ARHGEF16Q5VV41 709 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 NSUN6Q8TEA1 469 aaKnown RBP18.14■□□□□ 0.5
RPAIN-206ENST00000539417 PDCD2LQ9BRP1 358 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 MAF1Q9H063 256 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 FAM184BQ9ULE4 1060 aa18.14■□□□□ 0.5
RPAIN-206ENST00000539417 MYADML2A6NDP7 307 aa18.14■□□□□ 0.49
RPAIN-206ENST00000539417 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
RPAIN-206ENST00000539417 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
RPAIN-206ENST00000539417 SMPD1P17405 629 aa18.14■□□□□ 0.49
RPAIN-206ENST00000539417 PDE4DQ08499 809 aa18.14■□□□□ 0.49
RPAIN-206ENST00000539417 PAWRQ96IZ0 340 aaKnown RBP18.14■□□□□ 0.49
RPAIN-206ENST00000539417 PGBD1Q96JS3 809 aa18.14■□□□□ 0.49
RPAIN-206ENST00000539417 RNF26Q9BY78 433 aaPredicted RBP18.14■□□□□ 0.49
RPAIN-206ENST00000539417 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
RPAIN-206ENST00000539417 MAP3K20Q9NYL2 800 aaKnown RBP18.14■□□□□ 0.49
RPAIN-206ENST00000539417 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 RGS20O76081 388 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 ARIH2O95376 493 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 NR3C2P08235 984 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 PGM5Q15124 567 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 SMARCC2Q8TAQ2 1214 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 GTF3C6Q969F1 213 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 XPNPEP3Q9NQH7 507 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
RPAIN-206ENST00000539417 FRMPD4Q14CM0 1322 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 SMCO2A6NFE2 343 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 CPLX1O14810 134 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 CTAGE5O15320 804 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 MSCO60682 206 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 ADAMTS4O75173 837 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 RARBP10826 455 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 MYCLP12524 364 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 SSRP1Q08945 709 aaKnown RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 LRRC41Q15345 812 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 SAMD3Q8N6K7 520 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 COPS5Q92905 334 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 GNEQ9Y223 722 aaKnown RBP18.12■□□□□ 0.49
RPAIN-206ENST00000539417 SYNRGQ9UMZ2 1314 aa18.12■□□□□ 0.49
RPAIN-206ENST00000539417 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
RPAIN-206ENST00000539417 VSIG10LQ86VR7 867 aa18.11■□□□□ 0.49
RPAIN-206ENST00000539417 IWS1Q96ST2 819 aa18.11■□□□□ 0.49
RPAIN-206ENST00000539417 UPF2Q9HAU5 1272 aaKnown RBP18.11■□□□□ 0.49
RPAIN-206ENST00000539417 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
RPAIN-206ENST00000539417 JAK2O60674 1132 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 DUSP11O75319 330 aaKnown RBP18.1■□□□□ 0.49
RPAIN-206ENST00000539417 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
RPAIN-206ENST00000539417 ADCY7P51828 1080 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
RPAIN-206ENST00000539417 RABEP1Q15276 862 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 STXBP2Q15833 593 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 PPP1R18Q6NYC8 613 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 SEPT14Q6ZU15 432 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 CUL5Q93034 780 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 WDR11Q9BZH6 1224 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 KIAA1217Q5T5P2 1943 aa18.1■□□□□ 0.49
RPAIN-206ENST00000539417 COL6A1P12109 1028 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 CLK2P49760 499 aaKnown RBP18.09■□□□□ 0.49
RPAIN-206ENST00000539417 BEX3Q00994 111 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 NSUN7Q8NE18 718 aaKnown RBP18.09■□□□□ 0.49
RPAIN-206ENST00000539417 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 ALPK3Q96L96 1907 aa18.09■□□□□ 0.49
RPAIN-206ENST00000539417 hCG_1984214I3L0E3 225 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 DYNC1LI2O43237 492 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 EIF3JO75822 258 aaKnown RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 GJA9P57773 515 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 MLLT1Q03111 559 aaPredicted RBP18.08■□□□□ 0.49
RPAIN-206ENST00000539417 LY6KQ17RY6 165 aa18.08■□□□□ 0.49
RPAIN-206ENST00000539417 CCSAPQ6IQ19 270 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms