RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ANKRD7Q92527 254 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 CUL5Q93034 780 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 AMNQ9BXJ7 453 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 RANBP17Q9H2T7 1088 aaKnown RBP10.01□□□□□ -0.81
DDB1-213ENST00000539332 KIAA1468Q9P260 1216 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
DDB1-213ENST00000539332 ACTN4O43707 911 aaKnown RBP10□□□□□ -0.81
DDB1-213ENST00000539332 TOMM70O94826 608 aa10□□□□□ -0.81
DDB1-213ENST00000539332 MCM7P33993 719 aa10□□□□□ -0.81
DDB1-213ENST00000539332 LONP1P36776 959 aaKnown RBP10□□□□□ -0.81
DDB1-213ENST00000539332 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
DDB1-213ENST00000539332 FAM193AP78312 1265 aa10□□□□□ -0.81
DDB1-213ENST00000539332 GABPB1Q06547 395 aaPredicted RBP10□□□□□ -0.81
DDB1-213ENST00000539332 SNAPC2Q13487 334 aa10□□□□□ -0.81
DDB1-213ENST00000539332 MOGSQ13724 837 aa10□□□□□ -0.81
DDB1-213ENST00000539332 IL17AQ16552 155 aa10□□□□□ -0.81
DDB1-213ENST00000539332 MCTP2Q6DN12 878 aa10□□□□□ -0.81
DDB1-213ENST00000539332 KRBA2Q6ZNG9 492 aa10□□□□□ -0.81
DDB1-213ENST00000539332 GADL1Q6ZQY3 521 aa10□□□□□ -0.81
DDB1-213ENST00000539332 CATSPERGQ6ZRH7 1159 aa10□□□□□ -0.81
DDB1-213ENST00000539332 USP49Q70CQ1 688 aa10□□□□□ -0.81
DDB1-213ENST00000539332 FBXO11Q86XK2 927 aa10□□□□□ -0.81
DDB1-213ENST00000539332 FAM200AQ8TCP9 573 aa10□□□□□ -0.81
DDB1-213ENST00000539332 TBCKQ8TEA7 893 aa10□□□□□ -0.81
DDB1-213ENST00000539332 WNK4Q96J92 1243 aa10□□□□□ -0.81
DDB1-213ENST00000539332 TMEM60Q9H2L4 133 aa10□□□□□ -0.81
DDB1-213ENST00000539332 PCDHA1Q9Y5I3 950 aa10□□□□□ -0.81
DDB1-213ENST00000539332 A0A087X0B3 334 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 OPLAHO14841 1288 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 YY1P25490 414 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
DDB1-213ENST00000539332 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
DDB1-213ENST00000539332 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 TRAF1Q13077 416 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 AP3B2Q13367 1082 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 COG2Q14746 738 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 STX1AQ16623 288 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 USH1GQ495M9 461 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 LONRF3Q496Y0 759 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 JAKMIP3Q5VZ66 844 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 CCDC174Q6PII3 467 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
DDB1-213ENST00000539332 SAPCD2Q86UD0 394 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 KIAA1524Q8TCG1 905 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 CRYGNQ8WXF5 182 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 SDF4Q9BRK5 362 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 PSTPIP2Q9H939 334 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
DDB1-213ENST00000539332 BIN2Q9UBW5 565 aaPredicted RBP9.99□□□□□ -0.81
DDB1-213ENST00000539332 PCNTO95613 3336 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 VWA5AO00534 786 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MEIS2O14770 477 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ANO6Q4KMQ2 910 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SPRYD7Q5W111 196 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ZNF784Q8NCA9 323 aaPredicted RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MS4A4AQ96JQ5 239 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MBOAT7Q96N66 472 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 PYM1Q9BRP8 204 aaKnown RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 PRDM10Q9NQV6 1147 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 HOXC10Q9NYD6 342 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ZHX1Q9UKY1 873 aaPredicted RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 AGTPBP1Q9UPW5 1226 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ZNF536O15090 1300 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 MYPNQ86TC9 1320 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 VWA3AA6NCI4 1184 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SPDYE16A6NNV3 312 aaPredicted RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 POLR2DO15514 142 aaKnown RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 NEMFO60524 1076 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ICAM1P05362 532 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 SLFN14P0C7P3 912 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 ZBTB48P10074 688 aaPredicted RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 FDX1P10109 184 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 CETPP11597 493 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 GCFC2P16383 781 aaKnown RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 TAL1P17542 331 aaPredicted RBP9.98□□□□□ -0.81
DDB1-213ENST00000539332 DSG3P32926 999 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 GTF2A2P52657 109 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 E2F4Q16254 413 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 UBE2SQ16763 222 aa9.98□□□□□ -0.81
DDB1-213ENST00000539332 LETM2Q2VYF4 491 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms