RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 EXOSC10Q01780 885 aaKnown RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 WTAPQ15007 396 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 ASPRV1Q53RT3 343 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 GPATCH4Q5T3I0 446 aaKnown RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 SH3RF1Q7Z6J0 888 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 RALYLQ86SE5 291 aaKnown RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 SRBD1Q8N5C6 995 aaKnown RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 IL31RAQ8NI17 732 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 NUP133Q8WUM0 1156 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 COPS5Q92905 334 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 UIMC1Q96RL1 719 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 XPNPEP3Q9NQH7 507 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
LMO3-220ENST00000539232 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 CNPY2Q9Y2B0 182 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 ATP11BQ9Y2G3 1177 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 SYNRGQ9UMZ2 1314 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 BAHCC1Q9P281 2608 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 LRRC37A2A6NM11 1700 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 REV3LO60673 3130 aa8.43□□□□□ -1.06
LMO3-220ENST00000539232 PTPRZ1P23471 2315 aaPredicted RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 DNM1LO00429 736 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 ADAMTS3O15072 1205 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 TLL1O43897 1013 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 DHX16O60231 1041 aaKnown RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 EIF5BO60841 1220 aaKnown RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 ARIH2O95376 493 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 RARBP10826 455 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 ITGB8P26012 769 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 ALDH5A1P51649 535 aaPredicted RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 TRDNQ13061 729 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 KCNA10Q16322 511 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 TRIM60Q495X7 471 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 CCDC178Q5BJE1 867 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 SLC39A5Q6ZMH5 540 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 ZNF654Q8IZM8 581 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 KLHDC9Q8NEP7 349 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 KCNB2Q92953 911 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 BCAS3Q9H6U6 928 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 RIOX1Q9H6W3 641 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 GNEQ9Y223 722 aaKnown RBP8.42□□□□□ -1.06
LMO3-220ENST00000539232 TELO2Q9Y4R8 837 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 SNX14Q9Y5W7 946 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 WDR19Q8NEZ3 1342 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 XIRP2A4UGR9 3374 aa8.42□□□□□ -1.06
LMO3-220ENST00000539232 GRIN2DO15399 1336 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 AKR1A1P14550 325 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 EDNRBP24530 442 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 MCM5P33992 734 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 ACLYP53396 1101 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 FUT2Q10981 343 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 RNF207Q6ZRF8 634 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 ERMP1Q7Z2K6 904 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 MSL3Q8N5Y2 521 aaKnown RBP8.41□□□□□ -1.06
LMO3-220ENST00000539232 ARRDC4Q8NCT1 418 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 GPKOWQ92917 476 aaPredicted RBP eCLIP8.41□□□□□ -1.06
LMO3-220ENST00000539232 TRIM43Q96BQ3 446 aaPredicted RBP8.41□□□□□ -1.06
LMO3-220ENST00000539232 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
LMO3-220ENST00000539232 UPF3AQ9H1J1 476 aaKnown RBP8.41□□□□□ -1.06
LMO3-220ENST00000539232 ABHD16BQ9H3Z7 469 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 PDLIM7Q9NR12 457 aa8.41□□□□□ -1.06
LMO3-220ENST00000539232 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
LMO3-220ENST00000539232 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 ASB14A6NK59 587 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 ZBTB5O15062 677 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
LMO3-220ENST00000539232 SORBS3O60504 671 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 MSCO60682 206 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 DUSP11O75319 330 aaKnown RBP8.4□□□□□ -1.06
LMO3-220ENST00000539232 RGS20O76081 388 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 SEC24BO95487 1268 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 CFBP00751 764 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 EIF2AK2P19525 551 aaKnown RBP8.4□□□□□ -1.06
LMO3-220ENST00000539232 CDC27P30260 824 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 HSPA4P34932 840 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 EPHB4P54760 987 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 PSMC6P62333 389 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 TNFAIP2Q03169 654 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 TLE2Q04725 743 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 SNX17Q15036 470 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 TSGA10IPQ3SY00 556 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
LMO3-220ENST00000539232 NFXL1Q6ZNB6 911 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms