RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CRTC3Q6UUV7 619 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ARMCX6Q7L4S7 300 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 BRAPQ7Z569 592 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SRGAP1Q7Z6B7 1085 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CDH24Q86UP0 819 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 LRRTM3Q86VH5 581 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 TRIM48Q8IWZ4 208 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 KREMEN2Q8NCW0 462 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CPA5Q8WXQ8 436 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 PTPRN2Q92932 1015 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 EVI5LQ96CN4 794 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SYT3Q9BQG1 590 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ACSL6Q9UKU0 697 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CLCA2Q9UQC9 943 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 COQ6Q9Y2Z9 468 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 M0R2C6 588 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 NEMP1O14524 444 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GABRDO14764 452 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 MTSS1O43312 755 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CYP17A1P05093 508 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ITGA4P13612 1032 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CHMP4BP1P59074 171 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 MCL1Q07820 350 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 SEC23AQ15436 765 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GAB4Q2WGN9 574 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 GPAT2Q6NUI2 795 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 KRT73Q86Y46 540 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 IFNL3Q8IZI9 196 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 NXPE1Q8N323 547 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CHAC2Q8WUX2 184 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ASIC4Q96FT7 647 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 IPO9Q96P70 1041 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 ANO3Q9BYT9 981 aa1.45□□□□□ -2.18
HIF1A-204ENST00000539097 NOL6Q9H6R4 1146 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 RC3H2Q9HBD1 1191 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 CGGBP1Q9UFW8 167 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 TNPO3Q9Y5L0 923 aaKnown RBP1.45□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM265A0A087WTH1 108 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TCRBV5S4A2TA0A5A2 114 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 SHTN1A0MZ66 631 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FZD9O00144 591 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PPP1R11O60927 126 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CYP7B1O75881 506 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PDGFRBP09619 1106 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CD247P20963 164 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 IGFALSP35858 605 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TXKP42681 527 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RAB27AP51159 221 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 POLE2P56282 527 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PRKCQQ04759 706 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM62Q0P6H9 643 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 STRN3Q13033 797 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NBPF9Q3BBW0 867 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NBPF12Q5TAG4 269 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ACAD11Q709F0 780 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RBM12BQ8IXT5 1001 aaKnown RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TCEAL8Q8IYN2 117 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ANKS4BQ8N8V4 417 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FAM181AQ8N9Y4 354 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FAM13CQ8NE31 585 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RAX2Q96IS3 184 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ACAP3Q96P50 834 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 SMAD5Q99717 465 aaKnown RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PLVAPQ9BX97 442 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NKX2-4Q9H2Z4 354 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 JADE2Q9NQC1 790 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CHPF2Q9P2E5 772 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FAN1Q9Y2M0 1017 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 DAGLAQ9Y4D2 1042 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 KIAA1324LA8MWY0 1029 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 F5H0A9 414 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 STXBP3O00186 592 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 KPNA6O60684 536 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CAND2O75155 1236 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PPFIA4O75335 1185 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PEX14O75381 377 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 CRTAMO95727 393 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 SOD2P04179 222 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RAB6AP20340 208 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ITGB7P26010 798 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 INF2Q27J81 1249 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 KRTAP19-4Q3LI73 84 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 C19orf54Q5BKX5 351 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NAA35Q5VZE5 725 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 WFDC3Q8IUB2 231 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 ZC3H7AQ8IWR0 971 aaKnown RBP1.44□□□□□ -2.18
HIF1A-204ENST00000539097 FAM20CQ8IXL6 584 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 NIM1KQ8IY84 436 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 LRRN4CLQ8ND94 238 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 BVESQ8NE79 360 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 JDP2Q8WYK2 163 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 KCTD13Q8WZ19 329 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RSC1A1Q92681 617 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PRDM14Q9GZV8 571 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RNF38Q9H0F5 515 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 SEMA4AQ9H3S1 761 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 RAXQ9Y2V3 346 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHA9Q9Y5H5 950 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 TNKSO95271 1327 aa1.44□□□□□ -2.18
HIF1A-204ENST00000539097 hCG_2014768A0A024R1R8 64 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms