RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SPTLC3Q9NUV7 552 aa22.94■■□□□ 1.26
DDX55-205ENST00000538744 DOCK1Q14185 1865 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 H7C1D1 291 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 KLRC4O43908 158 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 CTNND1O60716 968 aaKnown RBP22.93■■□□□ 1.26
DDX55-205ENST00000538744 SREBF1P36956 1147 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 STX17P56962 302 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 KMT5BQ4FZB7 885 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 CCDC84Q86UT8 332 aaPredicted RBP22.93■■□□□ 1.26
DDX55-205ENST00000538744 SNX29Q8TEQ0 813 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 P2RX7Q99572 595 aaKnown RBP22.93■■□□□ 1.26
DDX55-205ENST00000538744 DEFB129Q9H1M3 183 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 KCNMB3Q9NPA1 279 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 SAMSN1Q9NSI8 373 aaKnown RBP22.93■■□□□ 1.26
DDX55-205ENST00000538744 RWDD2AQ9UIY3 292 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 PCDHA12Q9UN75 941 aa22.93■■□□□ 1.26
DDX55-205ENST00000538744 RHOBTB3O94955 611 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 TAL1P17542 331 aaPredicted RBP22.92■■□□□ 1.26
DDX55-205ENST00000538744 PAK1Q13153 545 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 HSP90AA4PQ58FG1 418 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 CCDC150Q8NCX0 1101 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 NAP1L5Q96NT1 182 aaPredicted RBP22.92■■□□□ 1.26
DDX55-205ENST00000538744 PNMA5Q96PV4 448 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 TRIM9Q9C026 710 aa22.92■■□□□ 1.26
DDX55-205ENST00000538744 CCDC174Q6PII3 467 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 SV2BQ7L1I2 683 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 SLFN12Q8IYM2 578 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 C17orf53Q8N3J3 647 aaPredicted RBP22.91■■□□□ 1.26
DDX55-205ENST00000538744 GTPBP4Q9BZE4 634 aaKnown RBP22.91■■□□□ 1.26
DDX55-205ENST00000538744 SMCHD1A6NHR9 2005 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 ARID5BQ14865 1188 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 TPD52L1Q16890 204 aaPredicted RBP22.91■■□□□ 1.26
DDX55-205ENST00000538744 TMEM119Q4V9L6 283 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 CDKAL1Q5VV42 579 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 DCAF15Q66K64 600 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 APOBEC3FQ8IUX4 373 aaKnown RBP22.91■■□□□ 1.26
DDX55-205ENST00000538744 VSTM4Q8IW00 320 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 LPAR1Q92633 364 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 GDAQ9Y2T3 454 aa22.91■■□□□ 1.26
DDX55-205ENST00000538744 MRPL11Q9Y3B7 192 aaKnown RBP22.91■■□□□ 1.26
DDX55-205ENST00000538744 TBX3O15119 743 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 WDR46O15213 610 aaKnown RBP22.9■■□□□ 1.26
DDX55-205ENST00000538744 SLC26A4O43511 780 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 HOXA13P31271 388 aaPredicted RBP22.9■■□□□ 1.26
DDX55-205ENST00000538744 Q4G0T1 1027 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 NELFBQ8WX92 580 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 LARP4BQ92615 738 aaKnown RBP22.9■■□□□ 1.26
DDX55-205ENST00000538744 HOOK2Q96ED9 719 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 KIAA1683Q9H0B3 1180 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 BLOC1S4Q9NUP1 217 aa22.9■■□□□ 1.26
DDX55-205ENST00000538744 ABCB11O95342 1321 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 KDM3AQ9Y4C1 1321 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 PRCPP42785 496 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 ASIC1P78348 528 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 STIM1Q13586 685 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 ADSSL1Q8N142 457 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 GIMAP8Q8ND71 665 aaPredicted RBP22.89■■□□□ 1.26
DDX55-205ENST00000538744 EXOC1Q9NV70 894 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 FBXO28Q9NVF7 368 aa22.89■■□□□ 1.26
DDX55-205ENST00000538744 GCOM1H8Y6P7 765 aaPredicted RBP22.88■■□□□ 1.25
DDX55-205ENST00000538744 CYP3A4P08684 503 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 POLR2MP0CAP2 368 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 CIITAP33076 1130 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 NBPF12Q5TAG4 269 aaPredicted RBP22.88■■□□□ 1.25
DDX55-205ENST00000538744 RAD54LQ92698 747 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 LRRC27Q9C0I9 530 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 INTS13Q9NVM9 706 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 LMNB1P20700 586 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 PRR16Q569H4 304 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 HYIQ5T013 277 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 ARHGAP27Q6ZUM4 889 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 ETNPPLQ8TBG4 499 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 GJA10Q969M2 543 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 CTAGE1Q96RT6 745 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 NT5C3AQ9H0P0 336 aa22.88■■□□□ 1.25
DDX55-205ENST00000538744 SBF1O95248 1867 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 CFBP00751 764 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 SKILP12757 684 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 SFPQP23246 707 aaKnown RBP eCLIP22.87■■□□□ 1.25
DDX55-205ENST00000538744 INPP5BP32019 993 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 CCZ1BP86790 482 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 CCZ1P86791 482 aaPredicted RBP22.87■■□□□ 1.25
DDX55-205ENST00000538744 MCM6Q14566 821 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 SAMD1Q6SPF0 538 aaPredicted RBP22.87■■□□□ 1.25
DDX55-205ENST00000538744 GPC2Q8N158 579 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 EHMT1Q9H9B1 1298 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 SPON1Q9HCB6 807 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 GPRC5DQ9NZD1 345 aa22.87■■□□□ 1.25
DDX55-205ENST00000538744 A0A1B0GTH6 734 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 CCT6AP40227 531 aaKnown RBP22.86■■□□□ 1.25
DDX55-205ENST00000538744 PPP1R2P41236 205 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 PDE4DQ08499 809 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 ANGEL2Q5VTE6 544 aaKnown RBP22.86■■□□□ 1.25
DDX55-205ENST00000538744 ARMCX5Q6P1M9 558 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 FCHSD1Q86WN1 690 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 LDHDQ86WU2 507 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 LENG9Q96B70 501 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 FAM20AQ96MK3 541 aa22.86■■□□□ 1.25
DDX55-205ENST00000538744 SLF1Q9BQI6 1058 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms